PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02673.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 87aa MW: 9563.55 Da PI: 6.0586

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02673.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	45.7	1.3e-14	10	46	23	59
EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +YYrC+ gC++kk+ve++ ed+++v++tY g Hnh Zmw_sc02673.1.g00030.1.sm.mk 10 NYYRCSADGCSMKKRVEQDCEDTRYVITTYDGVHNHA 46 6***********************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00774	1.2E-7	4	47	IPR003657	WRKY domain
PROSITE profile	PS50811	15.778	10	48	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.1E-13	10	48	IPR003657	WRKY domain
Pfam	PF03106	3.8E-10	10	45	IPR003657	WRKY domain
SuperFamily	SSF118290	4.58E-12	10	48	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 87 aa Download sequence Send to blast
MEILDDGFWN YYRCSADGCS MKKRVEQDCE DTRYVITTYD GVHNHASPAA ATIMQYGGGT 60 RAHGFYSLPH NGSPLAATSY SSGSLLF

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507). {ECO:0000250, ECO:0000269\|PubMed:21030507}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001309782.1	3e-31	uncharacterized protein LOC107546771
Refseq	XP_020394763.1	3e-31	uncharacterized protein LOC107546771 isoform X2
Swissprot	Q93WU9	2e-14	WRK51_ARATH; Probable WRKY transcription factor 51
TrEMBL	C4J6I0	7e-30	C4J6I0_MAIZE; Putative WRKY transcription factor 50
STRING	GRMZM2G163054_P04	1e-30	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP44308	3	3

Publications ? help Back to Top
Yan C, et al. Injury Activates Ca2+/Calmodulin-Dependent Phosphorylation of JAV1-JAZ8-WRKY51 Complex for Jasmonate Biosynthesis. Mol. Cell, 2018. 70(1): p. 136-149.e7 [PMID:29625034]