PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02739.1.g00220.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 181aa    MW: 18911.3 Da    PI: 12.3085
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02739.1.g00220.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.71.7e-10138181144
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                                   +g W  eEd  l++ v+++G+++W++I ++  + Rt+k+c++rw
  Zmw_sc02739.1.g00220.1.sm.mk 138 KGTWAVEEDAVLLEHVRLHGPRDWSSIRSKGLLPRTGKSCRLRW 181
                                   799************************8876677********** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129419.367133181IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-14133181IPR009057Homeodomain-like
SuperFamilySSF466894.52E-11134181IPR009057Homeodomain-like
PfamPF002495.0E-9138181IPR001005SANT/Myb domain
CDDcd001675.42E-11140181No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MSRGGGPVGE RRPRKSEVVG GGGAVARASS CARSSTRPLP APAASTGESN QSVGCQPNVL  60
RPATDTTPSL PPLLTAQKGQ SQGAAHFQTT SPTRSSRRAR ALRCAARGEA MARAPGAARR  120
RAAAGRKASG SSGESVRKGT WAVEEDAVLL EHVRLHGPRD WSSIRSKGLL PRTGKSCRLR  180
W
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57003357