PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02754.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 610aa MW: 65185.8 Da PI: 8.8849

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02754.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	93.1	4.4e-29	380	510	1	107
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pk................kvka....eekewyf 60 lppGfrF+Ptdeel+v+yL++++ +++l+++ i++++i+ ++P+dL p + +e e yf Zmw_sc02754.1.g00040.1.am.mk 380 LPPGFRFRPTDEELIVHYLRRRAFASPLPAAVDIPDIRILAHDPSDLlPPgelseaslaerslqaaH--RrggwNEPERYF 458 79*************************9666**********63246899999888765431..1333355588 PP NAM 61 FskrdkkyatgkrknratksgyWkatgkdkevlsk.....kgelvglkktLv 107 F++++ ky +g+r+nrat +gyWkatgk+k+v ++ + lvg+k++L+ Zmw_sc02754.1.g00040.1.am.mk 459 FTCKEAKYVKGRRANRATGAGYWKATGKEKPVAVAapggnQAVLVGMKRSLA 510 ********************************99888765555699999985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.57E-30	376	525	IPR003441	NAC domain
PROSITE profile	PS51005	27.086	380	548	IPR003441	NAC domain
Pfam	PF02365	6.1E-16	381	519	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence Send to blast
MRAAAFPGAA SALNPLLVSL LREPRPAATR TAAVSTSSDH MSELLCCKYK ILLQWLLCCL 60 RLSMLALILL AAASLRLAKE GCDDTALSCL FSSEITTLMP VLASAIDELR RLAPPSPATV 120 ESPRRLSGSS AMEAVRSRYS LISARSPFNE HSSSVSSAKL MAAKEKESIS STLGHRSSTY 180 RSLQSICKID QLFSDDAFAH LGVIASVLWS SHSLSPGAFL EAPLPSLNLK LRYAMKSGAG 240 MNPAVSGKGG GDVTGRPSPS SVPISLALAR SSAAPASSAA ETEQHEKELM RSQTEENGRE 300 KRRGPQCCTS ASLPKPVSPE PGPARQWKPS NNRQAGDQAG AAAIANKFLC QVSPRSTERS 360 ILDLASFPAM DAKEVVRRRL PPGFRFRPTD EELIVHYLRR RAFASPLPAA VDIPDIRILA 420 HDPSDLLPPG ELSEASLAER SLQAAHRRGG WNEPERYFFT CKEAKYVKGR RANRATGAGY 480 WKATGKEKPV AVAAPGGNQA VLVGMKRSLA SRADEGWVLC RVFRKRGSSA SDGTAPAEAD 540 ADADADERGA EEEGEGDDAA PASGFIDFFA RADRQRRRRA SSPVVTVSSS CLTDASHECR 600 DQDTTSGGCA

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence Send to blast

MRAAAFPGAA SALNPLLVSL LREPRPAATR TAAVSTSSDH MSELLCCKYK ILLQWLLCCL  60
RLSMLALILL AAASLRLAKE GCDDTALSCL FSSEITTLMP VLASAIDELR RLAPPSPATV  120
ESPRRLSGSS AMEAVRSRYS LISARSPFNE HSSSVSSAKL MAAKEKESIS STLGHRSSTY  180
RSLQSICKID QLFSDDAFAH LGVIASVLWS SHSLSPGAFL EAPLPSLNLK LRYAMKSGAG  240
MNPAVSGKGG GDVTGRPSPS SVPISLALAR SSAAPASSAA ETEQHEKELM RSQTEENGRE  300
KRRGPQCCTS ASLPKPVSPE PGPARQWKPS NNRQAGDQAG AAAIANKFLC QVSPRSTERS  360
ILDLASFPAM DAKEVVRRRL PPGFRFRPTD EELIVHYLRR RAFASPLPAA VDIPDIRILA  420
HDPSDLLPPG ELSEASLAER SLQAAHRRGG WNEPERYFFT CKEAKYVKGR RANRATGAGY  480
WKATGKEKPV AVAAPGGNQA VLVGMKRSLA SRADEGWVLC RVFRKRGSSA SDGTAPAEAD  540
ADADADERGA EEEGEGDDAA PASGFIDFFA RADRQRRRRA SSPVVTVSSS CLTDASHECR  600
DQDTTSGGCA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	6e-20	380	526	15	169	Stress-induced transcription factor NAC1

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	572	578	DRQRRRR