PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02779.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WOX

Protein Properties

Length: 659aa MW: 71274.6 Da PI: 10.6457

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02779.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.1	2.6e-17	39	98	2	56
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+++t eq+ +Le+l+e ++p+a+++++++ +l ++ ++V++WFqN++a+++ Zmw_sc02779.1.g00070.1.am.mk 39 NTRWNPTMEQVAVLERLYEHgVSTPTADQIQHITGRLrehgPIEAKNVFYWFQNHKARDR 98 58***************99**************999**************98 PP
2	Wus_type_Homeobox	103.6	1.3e-33	38	101	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW+Pt eQ+ +Le+ly++G+ tP++++iq+it +L+e+G ie kNVfyWFQN+kaR+r kq Zmw_sc02779.1.g00070.1.am.mk 38 QNTRWNPTMEQVAVLERLYEHGVSTPTADQIQHITGRLREHGPIEAKNVFYWFQNHKARDRSKQ 101 689**********************************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	10.414	35	100	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	1.9E-6	36	104	IPR009057	Homeodomain-like
SuperFamily	SSF46689	6.13E-10	37	106	IPR009057	Homeodomain-like
SMART	SM00389	9.5E-8	37	104	IPR001356	Homeobox domain
Pfam	PF00046	7.9E-15	39	98	IPR001356	Homeobox domain
CDD	cd00086	2.73E-5	40	101	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 659 aa Download sequence Send to blast
MEAPQGGAQG EASQATGQEA NAVSPPLSPA SAAAAAQQNT RWNPTMEQVA VLERLYEHGV 60 STPTADQIQH ITGRLREHGP IEAKNVFYWF QNHKARDRSK QKQEGFAYFT RMLRRAPSLP 120 VMARPPGPLG RMPASPPELT MAPPSAAAAC SNGSAAGTHV MYAAPYYMPA PAPQASAGNA 180 GYYNLPQAHF GAAVYPRMDI TQDKHMIPTG MNQAQAAAPY NNPQRVVHPA TSGGASAGHR 240 AGRGRETLEL FPLRPTFVLP DNNAPGAAAS LTPSTPSAAS PSFSGGESVS AAESPDSSAE 300 APPPPFYDFL GLQPSTSQPA NHRPNFRPVS ALARRVRATR EHRKKRLGHG GRYANDACRA 360 LEIKLVSEPR DPVLNSGSRH LNAAGQQDQI RAQDWTLNLK WRRCGQKTKQ NLRAYQSTTA 420 PDLHRGKTKN KARSRTYPGE LASDLKLPMQ RDAARGALTY PPPIMPLDYC TTVSGRSAHW 480 RRPRLPFFLL RVARRSAGSS GSFFWAIVLV GAENYGQFCV RCWHVLFSRV DLASLVILER 540 PEGRRRPTPM RLASFSIASE HVSNQVAKCV ASSSRARHVG SRTRTPPPPP LPRALDVTAG 600 GIRFDGSLHQ ASGDVLGLGT SPNALLFAET DGNFRLQSRF LKLEEPPLDP PCSISSVIA

Sequence ? help Back to Top

Protein Sequence Length: 659 aa Download sequence Send to blast

MEAPQGGAQG EASQATGQEA NAVSPPLSPA SAAAAAQQNT RWNPTMEQVA VLERLYEHGV  60
STPTADQIQH ITGRLREHGP IEAKNVFYWF QNHKARDRSK QKQEGFAYFT RMLRRAPSLP  120
VMARPPGPLG RMPASPPELT MAPPSAAAAC SNGSAAGTHV MYAAPYYMPA PAPQASAGNA  180
GYYNLPQAHF GAAVYPRMDI TQDKHMIPTG MNQAQAAAPY NNPQRVVHPA TSGGASAGHR  240
AGRGRETLEL FPLRPTFVLP DNNAPGAAAS LTPSTPSAAS PSFSGGESVS AAESPDSSAE  300
APPPPFYDFL GLQPSTSQPA NHRPNFRPVS ALARRVRATR EHRKKRLGHG GRYANDACRA  360
LEIKLVSEPR DPVLNSGSRH LNAAGQQDQI RAQDWTLNLK WRRCGQKTKQ NLRAYQSTTA  420
PDLHRGKTKN KARSRTYPGE LASDLKLPMQ RDAARGALTY PPPIMPLDYC TTVSGRSAHW  480
RRPRLPFFLL RVARRSAGSS GSFFWAIVLV GAENYGQFCV RCWHVLFSRV DLASLVILER  540
PEGRRRPTPM RLASFSIASE HVSNQVAKCV ASSSRARHVG SRTRTPPPPP LPRALDVTAG  600
GIRFDGSLHQ ASGDVLGLGT SPNALLFAET DGNFRLQSRF LKLEEPPLDP PCSISSVIA

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7509	35	48