PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02842.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 61aa MW: 6914.57 Da PI: 9.4844

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02842.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	27.7	5.3e-09	40	60	2	22
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 dDg++WrKYG K+ +s+fpr Zmw_sc02842.1.g00010.1.sm.mkhc 40 DDGHQWRKYGEKKLSNSNFPR 60 8*******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	1.5E-8	28	60	IPR003657	WRKY domain
SuperFamily	SSF118290	1.96E-8	32	60	IPR003657	WRKY domain
Pfam	PF03106	9.1E-7	40	60	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 61 aa Download sequence Send to blast
MALDSVPLYP GGDLGSGSRA TSRAHHQRIS WTADTYAPYD DGHQWRKYGE KKLSNSNFPR 60 Y

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020172253.1	1e-23	WRKY transcription factor 55-like
TrEMBL	A0A287NJ57	2e-23	A0A287NJ57_HORVV; Uncharacterized protein
STRING	EMT28936	4e-23	(Aegilops tauschii)
STRING	Traes_4AL_9E0D1CFA6.1	4e-23	(Triticum aestivum)
STRING	Traes_4DS_FE38A59D0.1	4e-23	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2032	35	100