PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02849.1.g00080.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TALE
Protein Properties Length: 554aa    MW: 58988.7 Da    PI: 6.438
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02849.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.42.4e-084214581954
                                   HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                      Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                                   Fe   ++yp+ +++  LA++ gLt +qV++WF N R +
  Zmw_sc02849.1.g00080.1.am.mk 421 FEHflKPYPDDHTKDVLAARSGLTRNQVSNWFINARVR 458
                                   5544589*****************************88 PP
2BELL38.52.8e-13284353470
                          BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeava...glgsakpYtslAlkaiSrhFrcLkdaiae 70 
                                   e q+ ++ Ll++l+++d++Y+q+ +++q   + F++ +   g g+a++ + +A +a+S  +  L+ +ia+
  Zmw_sc02849.1.g00080.1.am.mk 284 EAQRVRTDLLEMLQMLDQKYNQCLDEVQSTTAKFNTLIrqgGAGHATICAPFAHRAVSAMYHGLRRRIAG 353
                                   6788899****************************9975558999***********************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.2E-4207353IPR006563POX domain
PfamPF075262.9E-23212352IPR006563POX domain
PROSITE profilePS5007110.738399462IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.4E-24402475IPR009057Homeodomain-like
SMARTSM003899.1E-7402466IPR001356Homeobox domain
CDDcd000862.97E-11402463No hitNo description
SuperFamilySSF466892.48E-15404470IPR009057Homeodomain-like
PfamPF059206.3E-15419458IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    Send to blast
MASNPSTFPQ LGLEAINNGY FMAGNIIGGG GMMSADVTQF HPSMLLDHGG LGLGFGLGGA  60
AVTVAELGAQ FATNNVMLAA FANQLSAAAP ARSEEMDCGF DVAGGDSATY GMIWNGASDR  120
SGTVSALEPY LVELPDAARF HFPLETYGGG GGPSAPATSE LSLTLCSKSS SDSVLNTADQ  180
CSSGANSRSA LTELPQASFV RSRSTPAPFA AVVARSRYAA VAQEVLNDVM GCLLGGVADV  240
AAESGSGGAW PLGWSVDASS AVSSNRLVAS SEDGGDVAGA RAGEAQRVRT DLLEMLQMLD  300
QKYNQCLDEV QSTTAKFNTL IRQGGAGHAT ICAPFAHRAV SAMYHGLRRR IAGAVMAAGS  360
RPTCWGESSS ATAGDMEWSW ESAVIQKHWV AQKARRGEQP CWRPQRGLPE RSVAVLKAWM  420
FEHFLKPYPD DHTKDVLAAR SGLTRNQVSN WFINARVRIW KPMIEEMYKD LKRSSAGEQG  480
MEMEPQQIMS RAIRTKAVVR GLLLQQIFVC DTARTAALCS ELVLRLVTSP HGPFLFLFFE  540
RMETGHVSDG GPRM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025796845.10.0homeobox protein ATH1-like
TrEMBLA0A0A9NF720.0A0A0A9NF72_ARUDO; Uncharacterized protein
STRINGPavir.Ab00820.1.p1e-174(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31433365