PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02851.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 591aa MW: 63378.9 Da PI: 8.3986

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02851.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.3	2.4e-07	209	247	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 RR ++ ++f +L+ l+P + K s ++Le++++Y+ksLq Zmw_sc02851.1.g00010.1.am.mk 209 RRCKLSERFKTLQHLVPGC-----DKSSYNSTLEQTIQYMKSLQ 247 9***************9.....799999***********9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.623	197	246	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.3E-6	205	252	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	5.8E-5	209	247	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.3E-10	209	255	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.24E-7	209	251	No hit	No description
SuperFamily	SSF47459	1.44E-10	209	258	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:3.30.40.10	1.2E-7	498	556	IPR013083	Zinc finger, RING/FYVE/PHD-type
SuperFamily	SSF57850	1.88E-9	498	553	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence Send to blast
MMNYPYPTSP GWCYPDNAGG GEAAAEDYNG NSNIVDMFGD YTTDDLFEVV WRGGGGGGTL 60 AEPAISCHRL SPRFKLPSEA GVPEMLPRPP SEDEMAALLY EIVKGGEEQE HAHGDGGRGW 120 TDNNGRRAPS KNSSETSVVT KVASVEKNEK LPTGEDSTTK HIWPGHRDSD PDPDPSFPRW 180 TQHQPPASIG SKHALENEAT MRQSLLITRR CKLSERFKTL QHLVPGCDKS SYNSTLEQTI 240 QYMKSLQQQV QALATTTTTT PTPTPSAPSS LPSRAAHPVA QPLYVHPGPP VTLAPMVVLG 300 PVPMVPLGLG RVLPLPHYPA PVVVMPAAAT PMYTATPDPR FARPDAGLGR GSRSSIRGKD 360 PSPSQGRKRA LSKTTAQRVL PLPLCTHQPS PRQAILPACR SRPRRRPSSS LRNPAKESTC 420 RTQQRAQPSL RMASHPTLCF HSFHPPADAT PTLQRQPPPA SATSPPSMAS SRYITAHPTS 480 STLSPSRSCT RPPSTSGEPR SRASRGPCSA CGDDARAACR ACSYALCRAC LDEDTAEGRT 540 TCARCGGDYA ATEPDHGDGR SAEAEGEVES HQAGGGLRER VTMGSHLSDR Q

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence Send to blast

MMNYPYPTSP GWCYPDNAGG GEAAAEDYNG NSNIVDMFGD YTTDDLFEVV WRGGGGGGTL  60
AEPAISCHRL SPRFKLPSEA GVPEMLPRPP SEDEMAALLY EIVKGGEEQE HAHGDGGRGW  120
TDNNGRRAPS KNSSETSVVT KVASVEKNEK LPTGEDSTTK HIWPGHRDSD PDPDPSFPRW  180
TQHQPPASIG SKHALENEAT MRQSLLITRR CKLSERFKTL QHLVPGCDKS SYNSTLEQTI  240
QYMKSLQQQV QALATTTTTT PTPTPSAPSS LPSRAAHPVA QPLYVHPGPP VTLAPMVVLG  300
PVPMVPLGLG RVLPLPHYPA PVVVMPAAAT PMYTATPDPR FARPDAGLGR GSRSSIRGKD  360
PSPSQGRKRA LSKTTAQRVL PLPLCTHQPS PRQAILPACR SRPRRRPSSS LRNPAKESTC  420
RTQQRAQPSL RMASHPTLCF HSFHPPADAT PTLQRQPPPA SATSPPSMAS SRYITAHPTS  480
STLSPSRSCT RPPSTSGEPR SRASRGPCSA CGDDARAACR ACSYALCRAC LDEDTAEGRT  540
TCARCGGDYA ATEPDHGDGR SAEAEGEVES HQAGGGLRER VTMGSHLSDR Q