PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02904.1.g00090.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Trihelix

Protein Properties

Length: 942aa MW: 101655 Da PI: 6.9764

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02904.1.g00090.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.7	7e-09	193	271	1	70
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.........rergferspkqCkekwenlnkrykkikegekk 70 +Wt e+laL++ + +++ +r+ ++ ++W+ v+++ +r +r + +Ck +we l+ +y +++++e + Zmw_sc02904.1.g00090.1.am.mk 193 EWTPAETLALVAEVAAVDDGWSRSVSAFQKWAMVAENFaasevfasgPARRGKRAAGECKRRWEALAAEYDAVRRWEVR 271 5*****************************************999777779*********************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.632	186	259	IPR017877	Myb-like domain
Gene3D	G3DSA:3.30.200.20	1.8E-10	590	658	No hit	No description
SuperFamily	SSF56112	5.63E-14	590	769	IPR011009	Protein kinase-like domain
Pfam	PF07714	1.3E-4	647	694	IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain
Gene3D	G3DSA:1.10.510.10	1.9E-7	659	762	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006468	Biological Process	protein phosphorylation
GO:0009506	Cellular Component	plasmodesma
GO:0004672	Molecular Function	protein kinase activity

Sequence ? help Back to Top
Protein Sequence Length: 942 aa Download sequence Send to blast
MRNALFGSVA SPTKNGIYER WEREGSVTLG FHGVDATRVL RSRSPPVWGP PLSRPASDTT 60 SARDPQGSTW LRTRAPRRTR TVSTLARASS SLPHRLTAPA PARIAPASMD PPAADSRCVV 120 QALRASSNTR PAPPPPIKSL HSPAAKDHAP GASSSSSSRP PKPKRRLPRP TALPFGPAPP 180 SPRRTRSGES APEWTPAETL ALVAEVAAVD DGWSRSVSAF QKWAMVAENF AASEVFASGP 240 ARRGKRAAGE CKRRWEALAA EYDAVRRWEV RTGGGYWKMS AAARRKAGLP SEFDAEVYGA 300 MDALVRVEEA LLANAVAGGG AGEEVEGLVG SGAGVAVGEE NRGEPEICKE QVKKDELVDE 360 VQKDESGDEE EDEDGRDDEE ATKADPGNAD ASNTIEASKY ADENHTPSYS LSPDAMGTTR 420 QKADDLIKSL GGLLSYLNQF TELIKETGFE NVPGVAPSLH FLPATPSLPS ISTPSPPSHD 480 DACIAARGHR FSGNAAATST TTARVNDRLV RRDDDSAPPA RVTMARPWPP DRIHPAIVVV 540 VIAAAGVFLS PAAAQDGGRS EADVLIAFRN TLRGVDGAPP GPLRSWGTPG PGNFGSSYKA 600 TLCEGPAVVV KRFKDMNGVG REDFSEHMRR LGRLTHPNLL PLVAYLYKKE EKLLVTDHIS 660 PECTAPHGKP SKKSDVWSLG ILILEVLSGK FPATYLGSKG RQNTDLAGWV HAAVSEERTA 720 EVFDKDITGA AGAEADMVTL LQVGLGCCEA DVDRRWELKT AIARIDEIPV PPETVVVGDD 780 SSTPSLSNAG EHRSYSMICM RRARRDEGTV YAAAGHVHGW GPWGGLITFE MGWMVSDMVS 840 IDDQCMNDTT RDRLRRHKNL SPDDTFRARR ENVDQLVLGE DEDHRHARPA GAATEMRFLI 900 LVGYLFRFRS SLRVQYWTCT LWAAYWSGRC AGHEKIVADK GG

Sequence ? help Back to Top

Protein Sequence Length: 942 aa Download sequence Send to blast

MRNALFGSVA SPTKNGIYER WEREGSVTLG FHGVDATRVL RSRSPPVWGP PLSRPASDTT  60
SARDPQGSTW LRTRAPRRTR TVSTLARASS SLPHRLTAPA PARIAPASMD PPAADSRCVV  120
QALRASSNTR PAPPPPIKSL HSPAAKDHAP GASSSSSSRP PKPKRRLPRP TALPFGPAPP  180
SPRRTRSGES APEWTPAETL ALVAEVAAVD DGWSRSVSAF QKWAMVAENF AASEVFASGP  240
ARRGKRAAGE CKRRWEALAA EYDAVRRWEV RTGGGYWKMS AAARRKAGLP SEFDAEVYGA  300
MDALVRVEEA LLANAVAGGG AGEEVEGLVG SGAGVAVGEE NRGEPEICKE QVKKDELVDE  360
VQKDESGDEE EDEDGRDDEE ATKADPGNAD ASNTIEASKY ADENHTPSYS LSPDAMGTTR  420
QKADDLIKSL GGLLSYLNQF TELIKETGFE NVPGVAPSLH FLPATPSLPS ISTPSPPSHD  480
DACIAARGHR FSGNAAATST TTARVNDRLV RRDDDSAPPA RVTMARPWPP DRIHPAIVVV  540
VIAAAGVFLS PAAAQDGGRS EADVLIAFRN TLRGVDGAPP GPLRSWGTPG PGNFGSSYKA  600
TLCEGPAVVV KRFKDMNGVG REDFSEHMRR LGRLTHPNLL PLVAYLYKKE EKLLVTDHIS  660
PECTAPHGKP SKKSDVWSLG ILILEVLSGK FPATYLGSKG RQNTDLAGWV HAAVSEERTA  720
EVFDKDITGA AGAEADMVTL LQVGLGCCEA DVDRRWELKT AIARIDEIPV PPETVVVGDD  780
SSTPSLSNAG EHRSYSMICM RRARRDEGTV YAAAGHVHGW GPWGGLITFE MGWMVSDMVS  840
IDDQCMNDTT RDRLRRHKNL SPDDTFRARR ENVDQLVLGE DEDHRHARPA GAATEMRFLI  900
LVGYLFRFRS SLRVQYWTCT LWAAYWSGRC AGHEKIVADK GG

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6353	24	33