PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02906.1.g00060.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 460aa MW: 49638.9 Da PI: 8.5574

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02906.1.g00060.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	49.2	1.8e-15	11	61	1	52
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvk 52 lppGfrFhPtdeel+++yL++kv++ + + ++ e+d++k+ePw+Lp++++ Zmw_sc02906.1.g00060.1.am.mk 11 LPPGFRFHPTDEELITHYLARKVADPCFAA-LAVGEADLNKSEPWELPSELD 61 79*********************99888.67************96554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.88E-16	6	60	IPR003441	NAC domain
PROSITE profile	PS51005	16.338	11	189	IPR003441	NAC domain
Pfam	PF02365	6.0E-8	12	54	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence Send to blast
MEQELHQPME LPPGFRFHPT DEELITHYLA RKVADPCFAA LAVGEADLNK SEPWELPSEL 60 DSDASSLATP ALELVGFDPG PDETSYSLPA CLSRQCRATR RRRSPTGLID GGSSARGAGA 120 SRVAVSWNRS FLDGAGSRKG EPIDQRWLAR AIDDSNGARR ANGAGPPAPS QASGSFKNSG 180 IAFCLVCPYL PDIFASGIQL AAADCLRTGA GHELRFDMVT IRKLTAFDPE RKWKGEVCTS 240 KPPSSPAVGP GDETPAVYVQ RFVRSLVALE RQRVPVAIVS SLSLVCLQQL LMRTTSFTTP 300 WPESTGGHAG AGSSPYLHRR QISGTKPERE PLRRPATAGS TCMDKLTRES LPAPVRPLVD 360 LGLLLPLTTD AASTNDTTRN NESEDGALTR SKRSPRATCA PGRARKKARR DDDDHAYYVP 420 LAARAARGSP VLPFRGSNHR PRDDVSHPFP PAREEPQAAV

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence Send to blast

MEQELHQPME LPPGFRFHPT DEELITHYLA RKVADPCFAA LAVGEADLNK SEPWELPSEL  60
DSDASSLATP ALELVGFDPG PDETSYSLPA CLSRQCRATR RRRSPTGLID GGSSARGAGA  120
SRVAVSWNRS FLDGAGSRKG EPIDQRWLAR AIDDSNGARR ANGAGPPAPS QASGSFKNSG  180
IAFCLVCPYL PDIFASGIQL AAADCLRTGA GHELRFDMVT IRKLTAFDPE RKWKGEVCTS  240
KPPSSPAVGP GDETPAVYVQ RFVRSLVALE RQRVPVAIVS SLSLVCLQQL LMRTTSFTTP  300
WPESTGGHAG AGSSPYLHRR QISGTKPERE PLRRPATAGS TCMDKLTRES LPAPVRPLVD  360
LGLLLPLTTD AASTNDTTRN NESEDGALTR SKRSPRATCA PGRARKKARR DDDDHAYYVP  420
LAARAARGSP VLPFRGSNHR PRDDVSHPFP PAREEPQAAV