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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Zmw_sc02908.1.g00030.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family | bZIP | ||||||||
| Protein Properties | Length: 171aa MW: 19919.1 Da PI: 6.8932 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 41.6 | 2.7e-13 | 81 | 140 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
+r rr+++NRe+ArrsR RK++++ eL v L + N++L ++l++ ++++ e+
Zmw_sc02908.1.g00030.1.am.mk 81 ERRRRRMISNRESARRSRMRKQKQLSELWAQVVHLRSTNRQLLDQLNHVIRDCERVLHEN 140
6899*********************************************99999988876 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00338 | 1.2E-14 | 78 | 142 | IPR004827 | Basic-leucine zipper domain |
| Gene3D | G3DSA:1.20.5.170 | 1.6E-10 | 78 | 135 | No hit | No description |
| Pfam | PF00170 | 3.4E-10 | 80 | 140 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 10.703 | 80 | 143 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 7.39E-12 | 82 | 132 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 85 | 100 | IPR004827 | Basic-leucine zipper domain |
| CDD | cd14702 | 8.68E-15 | 87 | 127 | No hit | No description |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 171 aa Download sequence Send to blast |
MNMYPAEIAS IPYLSPSSAA SFNPHYHVST DDFLFQYNNM LAPHPTSYQD VAQLVHEASF 60 PVGNKSNSDE SDDYQRSLAE ERRRRRMISN RESARRSRMR KQKQLSELWA QVVHLRSTNR 120 QLLDQLNHVI RDCERVLHEN SQLRDEQTKL QKQLEKLPEV TTEASDMGTD S |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 81 | 102 | RRRRRMISNRESARRSRMRKQK |
| 2 | 94 | 101 | RRSRMRKQ |
| Binding Motif ? help Back to Top | |||
|---|---|---|---|
| Motif ID | Method | Source | Motif file |
| MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
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| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_002454348.1 | 1e-105 | basic leucine zipper 43 | ||||
| TrEMBL | A0A3L6RPG1 | 1e-104 | A0A3L6RPG1_PANMI; Basic leucine zipper 43 | ||||
| STRING | Sb04g029210.1 | 1e-104 | (Sorghum bicolor) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP1186 | 35 | 126 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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