PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02931.1.g00090.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 305aa    MW: 32693.7 Da    PI: 10.4771
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02931.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.29.2e-10282300321
                                     -SS-EEEEEEE--TT-SS- CS
                            WRKY   3 DgynWrKYGqKevkgsefp 21 
                                     D+y+WrKYGqK++kgs++p
  Zmw_sc02931.1.g00090.1.am.mkhc 282 DEYSWRKYGQKPIKGSPHP 300
                                     9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.7E-17232278IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.803.0E-9268300IPR003657WRKY domain
PROSITE profilePS5081111.176275300IPR003657WRKY domain
SuperFamilySSF1182906.54E-7278300IPR003657WRKY domain
PfamPF031067.1E-6282301IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MEEVEEANRA AVESCHRVLA LLAQPQDPAQ LRSVAKGTDE ACAKFRKVVS LLSNGGVGEA  60
GTSGGSGSHP KAKIASRRHN PGFFTKKSFL DSNTPVVVLN SAQPSPSSAQ VYPRNGAWDA  120
QSVNPLGGPP KMVQPLSAHF QFGNVSSRYH FHNQQQQKQK LQAEMFKRSN SGINLKFDST  180
SGTGTMSSAR SSFLSSLSMD GSVASLDGKS STFHLIGGPA MSDPVNAQQA PRRHCTGHGE  240
DGTGKCAVTG RCHCSKRSRK LRVKRSIKVP AISNKIADIP PDEYSWRKYG QKPIKGSPHP  300
SESEV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025795417.10.0protein WRKY1-like isoform X1
TrEMBLA0A2S3IK150.0A0A2S3IK15_9POAL; Uncharacterized protein
TrEMBLA0A2T7C3I70.0A0A2T7C3I7_9POAL; Uncharacterized protein
STRINGPavir.Ia01239.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28593887