PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03092.1.g00090.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 148aa    MW: 16254.1 Da    PI: 9.6554
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03092.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.67.6e-11104126123
                                   ---SS-EEEEEEE--TT-SS-EE CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                                   ldDg++WrKYGqK++ g+++prs
  Zmw_sc03092.1.g00090.1.sm.mk 104 LDDGFSWRKYGQKDILGAKYPRS 126
                                   59********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.1E-1091126IPR003657WRKY domain
SuperFamilySSF1182901.31E-898126IPR003657WRKY domain
PROSITE profilePS5081111.54399148IPR003657WRKY domain
SMARTSM007747.6E-6104140IPR003657WRKY domain
PfamPF031067.8E-8105128IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MESVGGDGGG RFTLESELAQ AQNILRELEA NMNQQAPAAR EICGELASRV ERSLRVARSW  60
VPPGSADGST GGSAAKDAQF KRRKGMPCVR SQVRVASLHD TAALDDGFSW RKYGQKDILG  120
AKYPRSALDH QRPHVTNHSQ TLRHTYEH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025806380.12e-42probable WRKY transcription factor 30
TrEMBLA0A2S3H9K05e-41A0A2S3H9K0_9POAL; Uncharacterized protein
TrEMBLA0A2T7EA475e-41A0A2T7EA47_9POAL; Uncharacterized protein
STRINGPavir.J01329.1.p4e-42(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183