PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03110.1.g00070.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 740aa    MW: 79577.3 Da    PI: 10.059
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03110.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-18470520155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  Zmw_sc03110.1.g00070.1.am.mk 470 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 520
                                   57*****887.**********843...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.89E-29470529No hitNo description
PfamPF008476.2E-13470520IPR001471AP2/ERF domain
SMARTSM003805.0E-37471534IPR001471AP2/ERF domain
PROSITE profilePS5103224.118471528IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.9E-32471529IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-21471529IPR016177DNA-binding domain
PRINTSPR003673.4E-10472483IPR001471AP2/ERF domain
PRINTSPR003673.4E-10494510IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 740 aa     Download sequence    Send to blast
MRCVPVRLLA QLGVAERAVD WAIKVRLGRA ILLTLNCGAV SSVCFADGTD QPPRTSVLVA  60
RRLMLAVEKS ARRSEATPSL ANANAGDLTA PASLAATSDP SLSARAPQAP RSRGSSGKPA  120
RASPAPGRGS RGQARSEQEP GTCRTDTVAC REEPAPPRRA RADYRNPRGA PLIKHAYLLL  180
LHYAYRSFCA VLPVTVRNSC GARTRRVGHK DGNSRCEPWP NFIIIIIFPT TLLRPSEELA  240
HLNEDKSNAK PDETQPNLGS GIAERVATGF RRTRRAGRDL SSSTPSPPFV GRLGARAIRR  300
PAGSHNLLRR AGAFSVCEQW HRHLGRAIFR HRHSVANESY RVDQLSRAHS TSSHFPLTLS  360
GKGAMESDAS HAPTTSSSSS SSSYCSLVNG GPEELSKKNP KPTMKRKRAA SPHCCQLEVE  420
ANNATVVPNG HGEESSSCCS TDDHAGSGDN NNNQAPAASS ATRRSGFKHP SYRGVRRRSW  480
GKWVSEIREP RKKSRIWLGT FPTAEMAARA HDVAALAIKG RAAHLNFPDR AHELPRPAST  540
SPADIQAAAA QAAAAAQCDA ASSSAELPSS PAAESAETAG PETVRADSNG AQEHALFDLP  600
DLLLDLRDGL WWSPVWPGPE AMAAEEYDVV GMQEPLLWIE DLGRANPTGT HTAMRGDDDR  660
LTWPEGQEGI DRSITLPLLP VAQRREPCLL SISRADALAG LSIGGARTPP THDYVKCTTG  720
RPDRRLPGSP VAAWSSRDRR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-17463528672Ethylene-responsive transcription factor ERF096
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354