PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03110.1.g00080.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 236aa    MW: 25371.8 Da    PI: 4.6029
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03110.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91e-1763112255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                    y+GVr +  +g+Wv+eIr+p++   + r++lg+f+ +e+Aa+a++ a+ +++g
  Zmw_sc03110.1.g00080.1.sm.mk  63 TYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFDDPEMAARAHDVAAIAIKG 112
                                   69****998.**********843...6**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-3163121IPR001471AP2/ERF domain
SMARTSM003801.6E-3763126IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-2163121IPR016177DNA-binding domain
PROSITE profilePS5103222.62963120IPR001471AP2/ERF domain
PfamPF008473.8E-1163112IPR001471AP2/ERF domain
CDDcd000188.09E-3364122No hitNo description
PRINTSPR003679.9E-106475IPR001471AP2/ERF domain
PRINTSPR003679.9E-1086102IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MEQEQASSLA DQAVSDGSTC SGNSNSSDSL MNASSPTSSG DDAGSVTASG GKKRPRRDLK  60
HPTYRGVRMR AWGKWVSEIR EPRKKSRIWL GTFDDPEMAA RAHDVAAIAI KGRNAHLNFP  120
ELAGELPRAA SAAPRDVXXA AATVASPDPA LRCHDEEELL ARGQATPECD VVSNAAPFGG  180
DMGLLDCTFL DVPDALLDFG HMFSPPRPLP SCCGSPWDDI IADDFCFEEP LLLWEH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-16601201172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164544.16e-74ethylene-responsive transcription factor ERF039-like
TrEMBLA0A3B6B3S12e-74A0A3B6B3S1_WHEAT; Uncharacterized protein
TrEMBLA0A446LD152e-74A0A446LD15_TRITD; Uncharacterized protein
STRINGTraes_2AL_0F08552FB.13e-75(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354