PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03169.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 388aa MW: 43814.3 Da PI: 11.0653

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03169.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	37.4	7.5e-12	162	291	15	128
NAM 15 vveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat...gkrknrat 78 + yL+kkv+g + l + +++ d++++ P L + + +++ ++ yfF+k++ ++ +r+ + t Zmw_sc03169.1.g00010.1.am.mk 162 LATYLRKKVDGADvfsdLANAAYFHDEDVCSARPDVLVRahtiparvpsREAGDGQQFYFFTKARFIGNKlnmRSRTIKNT 242 568*******98755333345**********74467777666432335557788888775554410133444433 PP NAM 79 k.sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128 + +W+a g+ k+v ++ g + L ++ ++ pk ek W+m ey++ Zmw_sc03169.1.g00010.1.am.mk 243 GdKETWHAEGSAKPVDG---TADGYMTKLSYHVKTGPKtVEKPGWIMTEYSF 291 34778*****965...6789999966555515799*****86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	16.644	148	307	IPR003441	NAC domain
Pfam	PF02365	2.4E-7	162	290	IPR003441	NAC domain
SuperFamily	SSF101941	2.88E-17	163	307	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence Send to blast
MRDLVRRLGW RGIKKFSPEL TDFGRRTAGG PRLRKLGKLR NQLVPEREDE NRCARELEQW 60 REQLLARSEG QRRLGGGGLR RRRREVKEAG RTGERGRRKE RPGKGAHGES SNTLPSKIDR 120 PAPAPRAPNR HHHPRSAAGA PTRRRRGRSR WQQWTTRSPS ALATYLRKKV DGADVFSDLA 180 NAAYFHDEDV CSARPDVLVR AHTIPARVPS REAGDGQQFY FFTKARFIGN KLNMRSRTIK 240 NTGDKETWHA EGSAKPVDGT ADGYMTKLSY HVKTGPKTVE KPGWIMTEYS FKDTKEGDLV 300 LCKIYKSPRG PGRSKAPSLP AMSDGKRKAA DDLGEATPST RPRQIDEDRQ HAAVLEFGAE 360 RSQLTQDMPA NSNSNSALED IDWSWFMP

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence Send to blast

MRDLVRRLGW RGIKKFSPEL TDFGRRTAGG PRLRKLGKLR NQLVPEREDE NRCARELEQW  60
REQLLARSEG QRRLGGGGLR RRRREVKEAG RTGERGRRKE RPGKGAHGES SNTLPSKIDR  120
PAPAPRAPNR HHHPRSAAGA PTRRRRGRSR WQQWTTRSPS ALATYLRKKV DGADVFSDLA  180
NAAYFHDEDV CSARPDVLVR AHTIPARVPS REAGDGQQFY FFTKARFIGN KLNMRSRTIK  240
NTGDKETWHA EGSAKPVDGT ADGYMTKLSY HVKTGPKTVE KPGWIMTEYS FKDTKEGDLV  300
LCKIYKSPRG PGRSKAPSLP AMSDGKRKAA DDLGEATPST RPRQIDEDRQ HAAVLEFGAE  360
RSQLTQDMPA NSNSNSALED IDWSWFMP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45