PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03185.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 148aa    MW: 17413.8 Da    PI: 12.3918
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03185.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.12.6e-0998127235
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgk 35 
                                   gy+GVr+++ +g+Wv+eIr+p +   r r +lgk
  Zmw_sc03185.1.g00040.1.am.mk  98 GYRGVRRRR-WGKWVSEIRVPGT---RERLWLGK 127
                                   8*****777.**********843...59****98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.81E-798126IPR016177DNA-binding domain
PROSITE profilePS5103212.45798126IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-1298126IPR001471AP2/ERF domain
SMARTSM003800.001798142IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MGHQRAVCER RDPLHRSKPN RNLPFRNSHR STAAYFFSRS KPQTNSARRS RHSIEHQQVG  60
ATCLSSEDRN HQLDRTPGRR TMRRATGSGE APAGERRGYR GVRRRRWGKW VSEIRVPGTR  120
ERLWLGKSVL TVHALKQQFL YCRRPFLR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6220522