PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03242.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 88aa MW: 9595.53 Da PI: 4.2208

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03242.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	27	1.3e-08	12	86	2	80
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeek..ewyfFskrdkkyatgkrknratks 80 ppG+ F+Ptdeel+ g++ + v +++ +++Pw+L +++ +++ fF rd++ ++ +r++r Zmw_sc03242.1.g00050.1.sm.mk 12 PPGLVFDPTDEELI-------GLGEPEAFPGViVEDNTAANTQPWKLLQNHGLSDDdvPAAFFYVRDESRPNARRSRRCDGG 86 8***********.......2344434434526667899*****74333333313558888889999999999997554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.92E-10	10	87	IPR003441	NAC domain
PROSITE profile	PS51005	9.82	11	88	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 88 aa Download sequence Send to blast
MSPAKFLGDD HPPGLVFDPT DEELIGLGEP EAFPGVIVED NTAANTQPWK LLQNHGLSDD 60 DVPAAFFYVR DESRPNARRS RRCDGGGT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A3L6QIZ7	2e-16	A0A3L6QIZ7_PANMI; Uncharacterized protein
STRING	Pavir.Aa02111.1.p	1e-15	(Panicum virgatum)
STRING	Pavir.Ia01183.1.p	2e-15	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8717	9	46