PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03262.1.g00080.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family FAR1
Protein Properties Length: 187aa    MW: 19294.7 Da    PI: 7.5744
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03262.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.61.7e-07651144390
                          FAR1  43 eekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                                   e+kk+ +e +    + +rtgC a+l++k+      ++vt + +eHnH+la
  Zmw_sc03262.1.g00080.1.am.mk  65 EHKKSqDEAAGPLCPDSRTGCLASLTIKLIPsAYAFRVTGFITEHNHPLA 114
                                   44444123333456789*************98999*************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.5E-561114IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MSTAPDPSHF SGGSSQSSPT SSGSSSPSSG AAELAATNLK QVVLTSAAED EADVAPTSPR  60
GFVQEHKKSQ DEAAGPLCPD SRTGCLASLT IKLIPSAYAF RVTGFITEHN HPLASAAPAV  120
SLALLLRCYQ SHHTTALVPL RACQTLRMAH TPTCTLGPRS MHMSFTTGTL STLDSVFVAP  180
TRSASVG
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3514522