PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03344.1.g00030.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 627aa    MW: 67758.1 Da    PI: 5.5323
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03344.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.8e-184796255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Zmw_sc03344.1.g00030.1.am.mk 47 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 96
                                  799******.7*********32...35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.31E-1847104IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.6E-2747104IPR001471AP2/ERF domain
PfamPF008471.9E-124796IPR001471AP2/ERF domain
CDDcd000181.96E-2947103No hitNo description
PROSITE profilePS5103219.83647104IPR001471AP2/ERF domain
SMARTSM003801.2E-3347110IPR001471AP2/ERF domain
PRINTSPR003673.8E-74859IPR001471AP2/ERF domain
PRINTSPR003673.8E-77086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    Send to blast
MELQFQKPQS HAQQQQCQYQ AVSVVAKETA GKLSRARSKC GGGGGGKFVG VRQRPSGRWV  60
AEIKDTTQKI RMWLGTFETA EEAARAYDEA ACLLRGANTR TNFAAAGGAG SAPPVSPLAS  120
RIRALLHHKK LKKTVARQPD VAFSPPAAAA YRHGGGTGSV AATSTSASTV TTTTSSVSPS  180
SSPSSTTIKF AMTSGGIRTP ILPVPSHHTF TEESACYRPY LLTTGSDEFQ HQYEQSWTLN  240
TSSLPPTDGR DNACSRMPEL EKISPEKDGP ASPPHGEDRV QGGQDFFDAG NDASDSLAWL  300
EGVWPARAWR RKREPIRSPA VIAADQLAIA MATAGVSSAA ERQRPSCKEE VVQLSRLLGD  360
SPSILALQRF SSAMDRRVAP SMDAGQDVWV WEVLLPDDHT SSSTTCLLDT TNLSDDQETK  420
EPMMITPPSS DTDVRDEPVD EFKDIGVVLD ESTEPSEEAA LPEATDLAAA SDGDEGEKPF  480
QSADTKKPDE VADPSAASDG KEEEKQFQSR DTKESVDDGE FEGEEDDAIK NEKGNGQERP  540
DCAMFSVGKL KVNGIGTLCS FGVAAATVCV FLIGGKLHHH HHRHQRRRRQ KIQLQFFGDD  600
DKTRVLHSPT PCDLQRIQQV VQQTSKG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1342112980Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39003273