PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03351.1.g00110.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 319aa    MW: 33588.1 Da    PI: 6.403
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03351.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.3e-11106153253
                                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                           HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                                   r++  + Er RR+ +++ f+eLr llP      skK +  +++e++++YI  
  Zmw_sc03351.1.g00110.1.am.mk 106 RTSTFMLERARRKLMKENFAELRALLPGV----SKKTNRETTVEETIRYIGV 153
                                   89999***********************8....7****************65 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.18E-12102170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.31E-9103159No hitNo description
PROSITE profilePS5088812.481104154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-11104173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.3E-8106154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-8110160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550218.02E-6244299No hitNo description
Gene3DG3DSA:3.30.70.2603.6E-4247313No hitNo description
PROSITE profilePS516719.277249319IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MAQDGHHAGH LQGADGNGTP PPAITREPGL GESSNQASTW TPVPAVAAEV DGSNGKGDDV  60
VPSVHGADLA AGNVDAGADV MVAEEDVSTK SKGKAPASDG AGKKARTSTF MLERARRKLM  120
KENFAELRAL LPGVSKKTNR ETTVEETIRY IGVLEDTVKT LEKRKQKLAV ERQRRQAAAQ  180
PDLGAGPSSA APPDAGQVPI LSPVLPQGWC WLPKQQPAAP GAVAEPPRVG FRTWTDSNVV  240
MNVCGDTAFI TVCAAPRPGV LVLLLSVLAK HHIDVLTLEI SSDANRSLFH MCTRLDPEAP  300
ASGDIFQLAL SEIIVWLSG
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2480335