PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03378.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 159aa MW: 17397.4 Da PI: 10.649

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03378.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.1	9.4e-14	30	73	3	46
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 e +r rrk++NRe+ArrsR+RK++ ++ L v +L+ +Nk+L Zmw_sc03378.1.g00040.1.sm.mkhc 30 ENRRKRRKESNRESARRSRLRKQQHLDGLNSQVNQLTDQNKQLG 73 5689*************************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.8E-11	25	73	No hit	No description
SMART	SM00338	1.3E-12	28	92	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.6E-11	30	72	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.749	30	72	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.88E-11	32	81	No hit	No description
CDD	cd14702	4.45E-16	33	81	No hit	No description
PROSITE pattern	PS00036	0	35	50	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence Send to blast
MSSGTFSGSS LGTRSSRSSE DGVNLQAQME NRRKRRKESN RESARRSRLR KQQHLDGLNS 60 QVNQLTDQNK QLGVALRVTS QNLVAVQAQN SVLQTQKLEL ESRLGSLAEI LLCLNPGTTA 120 STGSAANTAV MNDSLMTTTS GACTWSQPVA LYHHHHQCF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	32	37	RKRRKE
2	44	50	RRSRLRK
3	44	51	RRSRLRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003577967.1	1e-57	bZIP transcription factor 44
TrEMBL	A0A0A9GYA3	4e-59	A0A0A9GYA3_ARUDO; Uncharacterized protein
STRING	BRADI4G27720.1	5e-57	(Brachypodium distachyon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3740	32	76