PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03431.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 313aa MW: 32174.5 Da PI: 4.9149

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03431.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.7	1.3e-29	84	142	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+++WrKYGqK++kgs+fpr+YYrC+s+ gCp++k+vers+ dp+ v++tY+ eHnh+ Zmw_sc03431.1.g00070.1.sm.mkhc 84 TDEWAWRKYGQKPIKGSPFPRAYYRCSSSkGCPARKQVERSRLDPDKVIVTYSFEHNHS 142 69***********************998**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	30.217	78	144	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.5E-29	80	142	IPR003657	WRKY domain
SuperFamily	SSF118290	1.7E-24	81	142	IPR003657	WRKY domain
SMART	SM00774	4.6E-35	83	143	IPR003657	WRKY domain
Pfam	PF03106	1.7E-25	85	141	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence Send to blast
MDSEWNDGAA ASSPTESGCD GKVGAGDGAS TDSPGSPVSP VAPSPTAPAA SGRRRSANKR 60 VVTVPLADVS GPRPKGVGEG NTSTDEWAWR KYGQKPIKGS PFPRAYYRCS SSKGCPARKQ 120 VERSRLDPDK VIVTYSFEHN HSGAVPRVQN RQVIPKPKAQ TVPPEPAVES VSVGNMHDVA 180 ATATAATCAG ALATGGNSGA GSVEVHDDFR WLYDGVSVTS STSPSDADAA DDMLYGSMFF 240 GAAVSAHAPL PDEFGDVGAW FGAGEAAEED AMFAGLGELP ECAMVFRRHA GDGLAMAGAG 300 MKVEQPGEGT AMT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5w3x_B	8e-17	56	141	3	76	Disease resistance protein RRS1
5w3x_D	8e-17	56	141	3	76	Disease resistance protein RRS1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004969837.1	1e-119	probable WRKY transcription factor 65
TrEMBL	A0A3L6SUP7	1e-126	A0A3L6SUP7_PANMI; Putative WRKY transcription factor 65
STRING	Si002365m	1e-118	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP10947	33	41