PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03455.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 238aa    MW: 26038.2 Da    PI: 6.5187
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03455.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.55.9e-11121242126
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   ppG+ F+Ptdeel++ yL ++++g+   l  v i++    +++Pw+L             F +r  ++    r +r    g
  Zmw_sc03455.1.g00010.1.am.mk  12 PPGLIFDPTDEELIMLYLLPRTRGQADALPGViIDDDAAANAQPWKL-------------FPERPPHA---PRGRRCDGGG 76 
                                   8*************************888777588888999******.............44454444...4788888999 PP

                           NAM  82 yWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmhey 126
                                    Wk + + ++  ++      +++  ++k+ L +      +g+ t Wvm+e 
  Zmw_sc03455.1.g00010.1.am.mk  77 SWKIQKRGRKDAARhvlrvsGESIRWTKNKLKLS---VGTGTTTGWVMQEH 124
                                   **96665443333334555666778999999998...556778******96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.8E-1810139IPR003441NAC domain
PROSITE profilePS5100515.23911168IPR003441NAC domain
PfamPF023652.2E-1012124IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MLVAKLFGDD HPPGLIFDPT DEELIMLYLL PRTRGQADAL PGVIIDDDAA ANAQPWKLFP  60
ERPPHAPRGR RCDGGGSWKI QKRGRKDAAR HVLRVSGESI RWTKNKLKLS VGTGTTTGWV  120
MQEHFVDDLP SLRVCRISFA GRGEKRPRLQ PDDSSVPGEP VTRRLRVVAA AADSGSANCT  180
TTSLDHQKPG TADASEGQER RQSALGVAAM PNQEIQDSFG KIQEFTDALE DDEEPHGS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946