PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03584.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 482aa MW: 53126.6 Da PI: 4.6425

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03584.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	36.5	1.5e-11	64	195	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleev.ikevd.iykvePwdLpkkvka..eekewyfFskrdkkya..tgkr 73 +G+rF+Pt e+v+++L + ++g+ +++ + i++++ +y+ eP dL +++ +++ +f + ++k++ + r Zmw_sc03584.1.g00030.1.am.mk 64 HQGYRFQPTPREVVSRHLPRLIAGEIslmHDAIRPyIHDTNvVYDREPDDLAGMFQPtpATDDRFFTTVVRQKHRpgSAVR 144 68*******************99966533333349999637888*854333223335566555555555234559 PP NAM 74 knratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 r+++ g W + + +v+++ ++ ++g + L + ++g td +m+ey+ Zmw_sc03584.1.g00030.1.am.mk 145 DVRVADPGSWAVQRT-IDVMDEaGTVKIGELRRLRYR----KNGAYTDCLMEEYSC 195 99999998866.56666548888****97....78899******85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	9.42E-15	60	217	IPR003441	NAC domain
PROSITE profile	PS51005	18.12	63	217	IPR003441	NAC domain
Pfam	PF02365	1.0E-5	65	194	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence Send to blast
MRAREEDEAA ASGGRRGKRR LRVKAKCRAE RGDPSCDLRD VRRLDRGFPR METPPPIEEE 60 SALHQGYRFQ PTPREVVSRH LPRLIAGEIS LMHDAIRPYI HDTNVVYDRE PDDLAGMFQP 120 TPATDDRFFT TVVRQKHRPG SAVRDVRVAD PGSWAVQRTI DVMDEAGTVK IGELRRLRYR 180 KNGAYTDCLM EEYSCACSVK DAVDGDNERV FCRIYQEETT AADPQRGDQQ EEAAAAEPQV 240 AEPQADPLCS RRPDQSASTG RLHHEVDAAI TIPAPVSRLP VPFVSPDPLQ STEDAVDDDF 300 DEFFDKLDTM LACEPAGTAD PDDPAETDDE LVKIIETTLV TTTEDEDEDD DDDNWMRPFL 360 KPASLFAAAK CFACNGAVRA GTPRCPWFQQ QVPLHHPPSP LMQEPGLLGG ENCLGLSRSL 420 ACCASVSHKS SDFLLICVLY CCGRSRGSLE VQGASASISS PACLRCAVEA VALLCLSHCI 480 AG

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence Send to blast

MRAREEDEAA ASGGRRGKRR LRVKAKCRAE RGDPSCDLRD VRRLDRGFPR METPPPIEEE  60
SALHQGYRFQ PTPREVVSRH LPRLIAGEIS LMHDAIRPYI HDTNVVYDRE PDDLAGMFQP  120
TPATDDRFFT TVVRQKHRPG SAVRDVRVAD PGSWAVQRTI DVMDEAGTVK IGELRRLRYR  180
KNGAYTDCLM EEYSCACSVK DAVDGDNERV FCRIYQEETT AADPQRGDQQ EEAAAAEPQV  240
AEPQADPLCS RRPDQSASTG RLHHEVDAAI TIPAPVSRLP VPFVSPDPLQ STEDAVDDDF  300
DEFFDKLDTM LACEPAGTAD PDDPAETDDE LVKIIETTLV TTTEDEDEDD DDDNWMRPFL  360
KPASLFAAAK CFACNGAVRA GTPRCPWFQQ QVPLHHPPSP LMQEPGLLGG ENCLGLSRSL  420
ACCASVSHKS SDFLLICVLY CCGRSRGSLE VQGASASISS PACLRCAVEA VALLCLSHCI  480
AG

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1832	27	99