PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03624.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 543aa MW: 58592.8 Da PI: 10.9541

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03624.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	51.6	2.6e-16	342	430	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfsk 82 +q+lw++ De++lL+G fk++ g+ p d+ ++y f+++ is + + + K++rLK Kf++ + s+ Zmw_sc03624.1.g00010.1.am.mk 342 AQKLWTDADEVALLRGAAAFKERSGVAPRLpDMGDLYAFIRDTISPDLDQARVYYKLKRLKSKFQRSAPG-------ASST 415 79**********************98877*******************************998888.......7788 PP DUF573 83 ehdqkifelskkiWg 97 hd+ + +ls+ +Wg Zmw_sc03624.1.g00010.1.am.mk 416 VHDRLVRDLSSDLWG 430 999999999999998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	6.3E-15	343	430	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence Send to blast
MHRWEGGCDR AFTRRRWVGW WAQSSGFVGT GSSWRAPDGR LVGRSALQPP RPTGPHIESH 60 SGDAVVVGSP QQRPHARRGG TDVARKAISI AAVAAASASA SPNEPRYPPT AASTTAPSRA 120 GSKPSPSSRA ASASAESCSK SASMTMRALF LPLVWVSAGP RRHFLLATGE REGCFRYGSG 180 GGASVPALAD KEILAWMRAE RRRLSVHKDR PCFCKSQRKL IGVMVYLLGA RLPVSASPHL 240 KFKTPAPAAR RAADAVQAVI PERHGXXXXX XSPRAKSRVR DRRRSPNPNP SSRHRAPGLG 300 PASASGKSDR RSKPRSFADS TTLAAAAAAA AAVPASWSRG AAQKLWTDAD EVALLRGAAA 360 FKERSGVAPR LPDMGDLYAF IRDTISPDLD QARVYYKLKR LKSKFQRSAP GASSTVHDRL 420 VRDLSSDLWG SELAHRGEDG ERAEDDGADV EEAEGVNAIQ VHEPGRLPIV REVLGEYWRL 480 NGQALSGVSL EKGLSLVTPD EADVAEAKWR RQLVADMRMQ MHWHDLANEV YGLLMDAIKG 540 LGP

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence Send to blast

MHRWEGGCDR AFTRRRWVGW WAQSSGFVGT GSSWRAPDGR LVGRSALQPP RPTGPHIESH  60
SGDAVVVGSP QQRPHARRGG TDVARKAISI AAVAAASASA SPNEPRYPPT AASTTAPSRA  120
GSKPSPSSRA ASASAESCSK SASMTMRALF LPLVWVSAGP RRHFLLATGE REGCFRYGSG  180
GGASVPALAD KEILAWMRAE RRRLSVHKDR PCFCKSQRKL IGVMVYLLGA RLPVSASPHL  240
KFKTPAPAAR RAADAVQAVI PERHGXXXXX XSPRAKSRVR DRRRSPNPNP SSRHRAPGLG  300
PASASGKSDR RSKPRSFADS TTLAAAAAAA AAVPASWSRG AAQKLWTDAD EVALLRGAAA  360
FKERSGVAPR LPDMGDLYAF IRDTISPDLD QARVYYKLKR LKSKFQRSAP GASSTVHDRL  420
VRDLSSDLWG SELAHRGEDG ERAEDDGADV EEAEGVNAIQ VHEPGRLPIV REVLGEYWRL  480
NGQALSGVSL EKGLSLVTPD EADVAEAKWR RQLVADMRMQ MHWHDLANEV YGLLMDAIKG  540
LGP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008649213.1	5e-89	STOREKEEPER protein
Refseq	XP_008649214.1	5e-89	STOREKEEPER protein
Refseq	XP_020395036.1	5e-89	STOREKEEPER protein
STRING	GRMZM2G008558_P02	2e-88	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2682	27	63