PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03642.1.g00110.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 247aa    MW: 27035.5 Da    PI: 6.5239
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03642.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.12.7e-11141165226
                                   --SS-EEEEEEE--TT-SS-EEEEE CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYr 26 
                                   +Dgy+WrKYG K+++g++f+rsY+r
  Zmw_sc03642.1.g00110.1.sm.mk 141 EDGYEWRKYGEKSINGAQFTRSYFR 165
                                   7***********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.1E-10131165IPR003657WRKY domain
SuperFamilySSF1182904.05E-9134165IPR003657WRKY domain
SMARTSM007740.0014140182IPR003657WRKY domain
PfamPF031061.7E-8141165IPR003657WRKY domain
PROSITE profilePS5081110.177141165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MPVDDCDGAV REVAQVYELI KTKLPLFLLH HHGQQEPPLA QSLLSEALRA LNIALSAMTM  60
MQKRQQQREI SSSTTASPPL AVLKAKPQMS SPSAAPAAAG SGNGATTRTS ARSGKRRRSS  120
VTEGGKNSSS SWVNVTTVPY EDGYEWRKYG EKSINGAQFT RSYFRDPPPP PPPPPGGHQD  180
VAMNMMTMTK QEETVVLPPP LADVSVEEDS SSFRSSCNEL DMARIMAESL MGDDPELQLL  240
YNTFKYY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004978333.12e-43probable WRKY transcription factor 54
TrEMBLK3Y9144e-42K3Y914_SETIT; Uncharacterized protein
STRINGSi010706m7e-43(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50452663