PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03677.1.g00170.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 388aa MW: 42762.4 Da PI: 10.4953

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03677.1.g00170.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80	5.2e-25	28	102	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 e + w+fF++r++ +a+g r++r+t +gyWka g+ +v++++++++g++kt+vfy+grap+g+kt+W m+eyr+ Zmw_sc03677.1.g00170.1.am.mk 28 EGEPWFFFCPRQEGEARGGRPSRVTPTGYWKAAGTPAAVYAADRRAIGVRKTMVFYRGRAPSGTKTTWKMNEYRA 102 5678*********************************************************************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	29.175	1	143	IPR003441	NAC domain
Pfam	PF02365	2.1E-13	21	101	IPR003441	NAC domain
SuperFamily	SSF101941	3.66E-26	26	141	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence Send to blast
MHWSPLKTRR RAALGAEIHE RLCGGAGEGE PWFFFCPRQE GEARGGRPSR VTPTGYWKAA 60 GTPAAVYAAD RRAIGVRKTM VFYRGRAPSG TKTTWKMNEY RALQYDAGGT AEYGSSSSAH 120 AASPLSLPSQ LRSEFSLCRL YTRSGVLRQF DRRPLAGAAS CPGEGPAEPS MATAASLDDD 180 DGSGGSKQQQ MQLMEREGTL NVPGILDREE RTGAVDHVRF TCRAQALDHH FLPGRVPSRE 240 AHSCRQCTSR ESERGRPLGA ALDDRAMQLL RCSDVQSGTR LPARTAHSPV SSLASLPRPI 300 FHGLVEWIWI PGRMEWQVRF RDSVLLSAHF CRRGALPLSL CTFPEVDSLG NQQRGTTATT 360 RVSLRLRFPE GAAQRTANKS RLKLNMIR

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence Send to blast

MHWSPLKTRR RAALGAEIHE RLCGGAGEGE PWFFFCPRQE GEARGGRPSR VTPTGYWKAA  60
GTPAAVYAAD RRAIGVRKTM VFYRGRAPSG TKTTWKMNEY RALQYDAGGT AEYGSSSSAH  120
AASPLSLPSQ LRSEFSLCRL YTRSGVLRQF DRRPLAGAAS CPGEGPAEPS MATAASLDDD  180
DGSGGSKQQQ MQLMEREGTL NVPGILDREE RTGAVDHVRF TCRAQALDHH FLPGRVPSRE  240
AHSCRQCTSR ESERGRPLGA ALDDRAMQLL RCSDVQSGTR LPARTAHSPV SSLASLPRPI  300
FHGLVEWIWI PGRMEWQVRF RDSVLLSAHF CRRGALPLSL CTFPEVDSLG NQQRGTTATT  360
RVSLRLRFPE GAAQRTANKS RLKLNMIR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-17	27	104	69	144	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-17	27	104	69	144	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-17	27	104	69	144	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-17	27	104	69	144	NO APICAL MERISTEM PROTEIN
3swm_A	2e-17	27	104	72	147	NAC domain-containing protein 19
3swm_B	2e-17	27	104	72	147	NAC domain-containing protein 19
3swm_C	2e-17	27	104	72	147	NAC domain-containing protein 19
3swm_D	2e-17	27	104	72	147	NAC domain-containing protein 19
3swp_A	2e-17	27	104	72	147	NAC domain-containing protein 19
3swp_B	2e-17	27	104	72	147	NAC domain-containing protein 19
3swp_C	2e-17	27	104	72	147	NAC domain-containing protein 19
3swp_D	2e-17	27	104	72	147	NAC domain-containing protein 19
4dul_A	1e-17	27	104	69	144	NAC domain-containing protein 19
4dul_B	1e-17	27	104	69	144	NAC domain-containing protein 19