PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03756.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 651aa MW: 70464 Da PI: 10.5382

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03756.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.2	2.2e-06	339	367	3	31
HHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 3 rahnerErrRRdriNsafeeLrellPkas 31 +h+ +Er RR++i +++ L++l+P +s Zmw_sc03756.1.g00050.1.am.mk 339 NSHSLAERLRREKISERMKLLQDLVPGCS 367 58************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.49E-7	334	368	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.38E-4	334	370	No hit	No description
PROSITE profile	PS50888	9.883	336	393	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.5E-7	339	378	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 651 aa Download sequence Send to blast
MTARSSTGEC NAPRPASVAV HKARQRESGN KTWMAKEALS GMPVNHCLRV NSFFTFPCFF 60 NFTFALWLLG FPALLHRATS ALLREVQPRS TDMNNESNEK GMESNRASSG VAGIPVEWQN 120 QFSAAFPCPP AQQQAPMMDS FASAGLWAST SQAMGLSDAM SAARGTGFLA PVPGFLPQGL 180 GHFPVDSGFI ERAARASCFG GGGEMMGSSA GFGAADQPMS NAFSGSSEAL LDRQRKDGND 240 KAEPELDGHE EVPSSEAAGG DCSSKGTLDS KKRRRPNEVQ SSNLPANSAN ESVHSKDKGE 300 ESSPATTAGK SKGKGAKETS DAQKEEYIHV RARRGQATNS HSLAERLRRE KISERMKLLQ 360 DLVPGCSKVT MAYPSLGSQD LSMRPSQDGF QMRSRTGRRS TPMKPASHPC AAVRDTLARL 420 RRPVRLHAAG RLARSRWVGV SYGDSDAGSD NPARASGPAC HIPSTCLAPR ARCRRSRSPT 480 NVHRRTPVEV VRAPRDESRF VPRTRCHLPR HALYSTTAFL SPEELNMNSP AGRPFLSISS 540 VFADRPLPTR TLRVAATDIP GPSPEPHGMH GRMENWKDKQ HSQHGAATCN WNVARSYRCL 600 RLSETSFSSA PRGMTQMRRP CGAQGQRPET TRGHVRSSDS GLPAQQQLTS G

Sequence ? help Back to Top

Protein Sequence Length: 651 aa Download sequence Send to blast

MTARSSTGEC NAPRPASVAV HKARQRESGN KTWMAKEALS GMPVNHCLRV NSFFTFPCFF  60
NFTFALWLLG FPALLHRATS ALLREVQPRS TDMNNESNEK GMESNRASSG VAGIPVEWQN  120
QFSAAFPCPP AQQQAPMMDS FASAGLWAST SQAMGLSDAM SAARGTGFLA PVPGFLPQGL  180
GHFPVDSGFI ERAARASCFG GGGEMMGSSA GFGAADQPMS NAFSGSSEAL LDRQRKDGND  240
KAEPELDGHE EVPSSEAAGG DCSSKGTLDS KKRRRPNEVQ SSNLPANSAN ESVHSKDKGE  300
ESSPATTAGK SKGKGAKETS DAQKEEYIHV RARRGQATNS HSLAERLRRE KISERMKLLQ  360
DLVPGCSKVT MAYPSLGSQD LSMRPSQDGF QMRSRTGRRS TPMKPASHPC AAVRDTLARL  420
RRPVRLHAAG RLARSRWVGV SYGDSDAGSD NPARASGPAC HIPSTCLAPR ARCRRSRSPT  480
NVHRRTPVEV VRAPRDESRF VPRTRCHLPR HALYSTTAFL SPEELNMNSP AGRPFLSISS  540
VFADRPLPTR TLRVAATDIP GPSPEPHGMH GRMENWKDKQ HSQHGAATCN WNVARSYRCL  600
RLSETSFSSA PRGMTQMRRP CGAQGQRPET TRGHVRSSDS GLPAQQQLTS G

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2909	37	85