PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03765.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 702aa MW: 76282.3 Da PI: 10.9885

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03765.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.1	5.6e-07	331	359	3	31
HHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 3 rahnerErrRRdriNsafeeLrellPkas 31 +h+ +Er RR++i +++ L++l+P++s Zmw_sc03765.1.g00010.1.am.mk 331 NSHSLAERLRREKISERMKLLQDLVPSCS 359 58*************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.14E-7	326	361	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.98E-4	326	360	No hit	No description
PROSITE profile	PS50888	10.144	328	383	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	2.1E-4	331	359	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.3E-7	332	362	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence Send to blast
MHRAEAGQRC RAQDRKKKES AEPLLSYGLL LFIRNKKDEE RKRQLSCAVV ESKVKQEVLS 60 SACCRTVRLL RCCVTVATSM DMNNESNEKG MESNRASSGA AGIPVEWQNQ FSAAFPCPPA 120 QQQASMMDSF ASAGLWASTS QAMGLSDAMS AGRGSGFLAP VPGFLPQGLG HFPVDSGFIE 180 RAARASCFGG SGGGVMAANA GFGAADQPMN NAFSGSSEAL LDHQRKDGNG KAETDLGRNG 240 HGEVRSSEAA GGDCSSKGTS ESKKRRRPNE VQSSNLPADS ANESVHSKDK GEESSPATTT 300 GKSKGKGAKE TSESQKEEYI HVRARRGQAT NSHSLAERLR REKISERMKL LQDLVPSCSK 360 MAHAMNGSFS DVTQMAYPSL GSQNLSMRPS QNGRRRITDA ASAGWAAPQC ELIAPFNCVM 420 HAPDSRRTQW TRFGTFCRRR QRSRTKARQR RAMMMKPRHP VRGRTRHAPA IPPVCVQPAR 480 PDRGGCELRR PRRQIGQRSE RIYFVAYSDR AAGWVAIERE LSKAQAARYL EQLVWRAPFL 540 VVVASLVGWP HPSSKMCSPL VLIRRFSTAE IPQKRPVAVR SEWRWRRTVR EQQRRPGSNG 600 GGQGAKGRCG GAFGLLGVAG DTSNCANDGE DPCYAAALGG ELRSIVLKVG GRRVHEFKRS 660 RRVAAARECV FGAEGVMAEA AGRALLSGRR GNGGNAHGRG RR

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence Send to blast

MHRAEAGQRC RAQDRKKKES AEPLLSYGLL LFIRNKKDEE RKRQLSCAVV ESKVKQEVLS  60
SACCRTVRLL RCCVTVATSM DMNNESNEKG MESNRASSGA AGIPVEWQNQ FSAAFPCPPA  120
QQQASMMDSF ASAGLWASTS QAMGLSDAMS AGRGSGFLAP VPGFLPQGLG HFPVDSGFIE  180
RAARASCFGG SGGGVMAANA GFGAADQPMN NAFSGSSEAL LDHQRKDGNG KAETDLGRNG  240
HGEVRSSEAA GGDCSSKGTS ESKKRRRPNE VQSSNLPADS ANESVHSKDK GEESSPATTT  300
GKSKGKGAKE TSESQKEEYI HVRARRGQAT NSHSLAERLR REKISERMKL LQDLVPSCSK  360
MAHAMNGSFS DVTQMAYPSL GSQNLSMRPS QNGRRRITDA ASAGWAAPQC ELIAPFNCVM  420
HAPDSRRTQW TRFGTFCRRR QRSRTKARQR RAMMMKPRHP VRGRTRHAPA IPPVCVQPAR  480
PDRGGCELRR PRRQIGQRSE RIYFVAYSDR AAGWVAIERE LSKAQAARYL EQLVWRAPFL  540
VVVASLVGWP HPSSKMCSPL VLIRRFSTAE IPQKRPVAVR SEWRWRRTVR EQQRRPGSNG  600
GGQGAKGRCG GAFGLLGVAG DTSNCANDGE DPCYAAALGG ELRSIVLKVG GRRVHEFKRS  660
RRVAAARECV FGAEGVMAEA AGRALLSGRR GNGGNAHGRG RR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	439	450	RQRSRTKARQRR

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2909	37	85