PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03832.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 352aa MW: 37799.2 Da PI: 8.9801

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03832.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100.6	2.2e-31	151	275	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya.tgkrknratks 80 lp+GfrFhPtdeel+ +yL++k+ + +l++ ++i+ +d+ +++PwdL ++e + F+ +++ + ++ra+ + Zmw_sc03832.1.g00050.1.am.mk 151 LPVGFRFHPTDEELLLHYLRRKALACSLPA-DIIPVADLARLHPWDLV-PPGDADEERFLFHLPATRCWrRAGGARRAAGT 229 79**************************.99**********5.2334566777666665555516778888 PP NAM 81 gyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 g+W+a+gk k v+s g+ vg k+tLvf ++ g++tdW+mheyrl Zmw_sc03832.1.g00050.1.am.mk 230 GVWRASGKAKLVVSPrCGRPVGEKRTLVFC---HRGGKRTDWLMHEYRL 275 ********99878999*****9...677889******97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.35E-40	148	315	IPR003441	NAC domain
PROSITE profile	PS51005	39.762	151	316	IPR003441	NAC domain
Pfam	PF02365	1.1E-19	152	275	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence Send to blast
MNRGMDTGAA VRVHVLCRAG STVHQDRRHG MERDATHATP SVLFLYPARA PAVPSSSLHA 60 TDATAEACAS DSERHCDVFP ELEAHPRRTA LVVLPLPQST ESSAAITDVR TSSPSCMLGG 120 AGHRASRRCV AMEARQAAGA AAAGGGALAG LPVGFRFHPT DEELLLHYLR RKALACSLPA 180 DIIPVADLAR LHPWDLVPPG DADEERFLFH LPATRCWRRA GGARRAAGTG VWRASGKAKL 240 VVSPRCGRPV GEKRTLVFCH RGGKRTDWLM HEYRLLPAGL LLPHNPSSAA PHVMNCHGDG 300 AAAGAEDWVV CRIFKRTKPG HGGRGGEEAE EIPSFLFTKH LLTCTNRPLL PT

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence Send to blast

MNRGMDTGAA VRVHVLCRAG STVHQDRRHG MERDATHATP SVLFLYPARA PAVPSSSLHA  60
TDATAEACAS DSERHCDVFP ELEAHPRRTA LVVLPLPQST ESSAAITDVR TSSPSCMLGG  120
AGHRASRRCV AMEARQAAGA AAAGGGALAG LPVGFRFHPT DEELLLHYLR RKALACSLPA  180
DIIPVADLAR LHPWDLVPPG DADEERFLFH LPATRCWRRA GGARRAAGTG VWRASGKAKL  240
VVSPRCGRPV GEKRTLVFCH RGGKRTDWLM HEYRLLPAGL LLPHNPSSAA PHVMNCHGDG  300
AAAGAEDWVV CRIFKRTKPG HGGRGGEEAE EIPSFLFTKH LLTCTNRPLL PT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-25	151	316	17	165	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-25	151	316	17	165	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-25	151	316	17	165	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-25	151	316	17	165	NO APICAL MERISTEM PROTEIN
3swm_A	2e-25	151	316	20	168	NAC domain-containing protein 19
3swm_B	2e-25	151	316	20	168	NAC domain-containing protein 19
3swm_C	2e-25	151	316	20	168	NAC domain-containing protein 19
3swm_D	2e-25	151	316	20	168	NAC domain-containing protein 19
3swp_A	2e-25	151	316	20	168	NAC domain-containing protein 19
3swp_B	2e-25	151	316	20	168	NAC domain-containing protein 19
3swp_C	2e-25	151	316	20	168	NAC domain-containing protein 19
3swp_D	2e-25	151	316	20	168	NAC domain-containing protein 19
4dul_A	2e-25	151	316	17	165	NAC domain-containing protein 19
4dul_B	2e-25	151	316	17	165	NAC domain-containing protein 19
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025817663.1	1e-71	NAC domain-containing protein 10-like isoform X2
TrEMBL	A0A1E5W9V1	9e-74	A0A1E5W9V1_9POAL; NAC transcription factor ONAC010
STRING	Pavir.Eb03721.1.p	3e-76	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8233	30	47