PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03838.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 161aa MW: 17427.9 Da PI: 11.1608

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03838.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.9	5.8e-10	67	108	1	42
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 e+e++r+rrk +NR++A+rsR+RK+++++eL+ ++ L ae Zmw_sc03838.1.g00070.1.sm.mk 67 EEERRRQRRKLSNRLSAQRSRARKQQRLDELRASAARLRAEK 108 7899**********************************9996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.880.10	2.4E-6	64	98	IPR008917	Transcription factor, Skn-1-like, DNA-binding domain
SMART	SM00338	0.0029	66	129	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.45	69	108	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.47E-5	71	108	No hit	No description
PROSITE pattern	PS00036	0	74	89	IPR004827	Basic-leucine zipper domain
CDD	cd14702	7.27E-11	76	108	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence Send to blast
MLSAQEALGL ENLVAPSCCG GARDQDMIAS GFTPWGPESC PSLDQVMMAA SSATPSPPAG 60 QGADEEEEER RRQRRKLSNR LSAQRSRARK QQRLDELRAS AARLRAEKXX XXAAALARRL 120 REARRLLALQ RLARFQPLPP HPMAEQAGGA APAVGLASLM T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	76	ERRRQRRKL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002466386.1	1e-33	DNA-binding protein EMBP-1
TrEMBL	C5WZ82	3e-32	C5WZ82_SORBI; Uncharacterized protein
STRING	Sb01g006850.1	4e-33	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13845	24	29