PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03967.1.g00080.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 328aa MW: 36667.8 Da PI: 8.8317

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03967.1.g00080.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	47.3	6.7e-15	42	174	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleev.ikev.diykvePwdLpkkvka..eekewyfFskrdkkya...tgk 72 +G+rF+Pt e+v+++L + ++ + +++ + i+++ ++y+ eP dL +++ +++ +fF++ ++++ ++ Zmw_sc03967.1.g00080.1.am.mk 42 HQGYRFQPTPREVVSRHLPRLIACELrlmHDAIRPyIHDTnGVYDREPDDLAGMFQPtpATDDRFFFTTVVRQKHrpgSSV 122 68*****************998885653333335999978*****853333225557899988776666233455 PP NAM 73 rknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 r r++ g W + + + ++++ ++g + L + ++g tdW+m+ey+ Zmw_sc03967.1.g00080.1.am.mk 123 RYVRVAGPGSWALQRSIDVLDEAGTVKIGELRRLRYK----KNGAYTDWLMKEYSC 174 88889999888766555668899****97....78999******85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.22E-18	36	196	IPR003441	NAC domain
PROSITE profile	PS51005	21.217	41	196	IPR003441	NAC domain
Pfam	PF02365	1.7E-9	43	173	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MRAREEDEAA ARGDRRGKRR LRLASLARIE TPPPIKEESA LHQGYRFQPT PREVVSRHLP 60 RLIACELRLM HDAIRPYIHD TNGVYDREPD DLAGMFQPTP ATDDRFFFTT VVRQKHRPGS 120 SVRYVRVAGP GSWALQRSID VLDEAGTVKI GELRRLRYKK NGAYTDWLMK EYSCACSVKD 180 AVDGDNERVF CRIYVSPNAA NNNKKRPLPL SLKSPSPKRI QRAPVAPIGP IPPAGCTTKS 240 TLLSPHRPAA GPSAPTPPAD QAPHPDTPRP APVSRLPVPF VSPDPLQSTE DAVDDDFDEL 300 FDKLDTMLAY VEVSFPPCFD LCKFQLLT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012703694.1	2e-45	uncharacterized protein LOC101768364
TrEMBL	A0A368S8U7	1e-43	A0A368S8U7_SETIT; Uncharacterized protein
TrEMBL	K3ZME8	5e-44	K3ZME8_SETIT; Uncharacterized protein
STRING	Si011838m	4e-44	(Setaria italica)
STRING	Si027763m	8e-45	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1832	27	99