PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04017.1.g00090.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 139aa MW: 15264.5 Da PI: 10.4775

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04017.1.g00090.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	62.5	8.1e-20	93	139	2	48
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkS 48 r+rWtpeLHe+Fveav+ LGGsekAtPk+ ++mkvk+ + v+S Zmw_sc04017.1.g00090.1.sm.mk 93 LRMRWTPELHEQFVEAVNLLGGSEKATPKAAQKVMKVKDPKKAAVAS 139 69***********************************9877777766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	5.55E-8	89	132	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	5.0E-15	91	139	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.9E-13	92	131	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 139 aa Download sequence Send to blast
MVWAPRGGGL VRGFVDLLGL AGGRTSSAAS ATWRCGEVKN ARRWPWALFF EEDVDARSLT 60 PKNHLLRSSL PPFNYDEIST DNLPSSSTTP TKLRMRWTPE LHEQFVEAVN LLGGSEKATP 120 KAAQKVMKVK DPKKAAVAS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-14	92	130	2	40	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-14	92	130	2	40	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	3e-14	92	130	1	39	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	3e-14	92	130	1	39	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	3e-14	92	130	1	39	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	3e-14	92	130	1	39	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-14	92	130	2	40	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-14	92	130	2	40	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-14	92	130	2	40	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-14	92	130	2	40	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-14	92	130	2	40	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-14	92	130	2	40	Protein PHOSPHATE STARVATION RESPONSE 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002454768.2	2e-24	protein PHOSPHATE STARVATION RESPONSE 2 isoform X2
Refseq	XP_021315087.1	2e-24	protein PHOSPHATE STARVATION RESPONSE 2 isoform X1
Refseq	XP_021315088.1	2e-24	protein PHOSPHATE STARVATION RESPONSE 2 isoform X3
TrEMBL	A0A0A9MIF3	3e-29	A0A0A9MIF3_ARUDO; Uncharacterized protein
STRING	Sb04g036955.1	6e-24	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP28462	3	5