PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04036.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 356aa MW: 37582.6 Da PI: 4.818

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04036.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.9	2.4e-14	178	238	2	62
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ +r+ r+++NRe+A+ sRqRKk ++eeLeekvk++ + +L ++++ e a+l+++ Zmw_sc04036.1.g00020.1.sm.mkhc 178 EDPRRAARLMRNRESAQLSRQRKKRYVEELEEKVKSMHSVINDLNSRISFVMAENATLRQQ 238 66789*********************************99****9999999999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.7E-16	177	241	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.933	179	239	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.9E-12	180	238	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.3E-15	181	239	No hit	No description
SuperFamily	SSF57959	3.56E-12	181	239	No hit	No description
CDD	cd14704	1.97E-19	182	233	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence Send to blast
MAEPALLDPS AFDLRHYPAH LFDPDLPMAG GGLPLGEFAG DGDCDGFDFD LPADFSVDDF 60 LLRSPDRGDD DDNSGEGSAA GSGPAPSSAA SPSTSAANSA VAHGEGEVKH EDSDEGRSGG 120 DAPASWSLKR KQASPELSTD GAKCRRSGDG ELSPSASALA SRAAAEGFDE RGTAGEEEDP 180 RRAARLMRNR ESAQLSRQRK KRYVEELEEK VKSMHSVIND LNSRISFVMA ENATLRQQMG 240 SGGGGSGPPP GVVYPPAPLP GMPFPWIPGY AMRPHGSHVP LVPIPRLKPQ QTASAAKVSK 300 KPEIKKSAEA RYLSPPGKDK NSQEASPADA PLPQWFREGM EGPILNSGMC SEILIT

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence Send to blast

MAEPALLDPS AFDLRHYPAH LFDPDLPMAG GGLPLGEFAG DGDCDGFDFD LPADFSVDDF  60
LLRSPDRGDD DDNSGEGSAA GSGPAPSSAA SPSTSAANSA VAHGEGEVKH EDSDEGRSGG  120
DAPASWSLKR KQASPELSTD GAKCRRSGDG ELSPSASALA SRAAAEGFDE RGTAGEEEDP  180
RRAARLMRNR ESAQLSRQRK KRYVEELEEK VKSMHSVIND LNSRISFVMA ENATLRQQMG  240
SGGGGSGPPP GVVYPPAPLP GMPFPWIPGY AMRPHGSHVP LVPIPRLKPQ QTASAAKVSK  300
KPEIKKSAEA RYLSPPGKDK NSQEASPADA PLPQWFREGM EGPILNSGMC SEILIT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269\|PubMed:22050533, ECO:0000269\|PubMed:22084314}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000269\|PubMed:22084314}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001148077.1	1e-139	uncharacterized protein LOC100281685
Swissprot	Q6AU90	1e-104	BZP39_ORYSJ; bZIP transcription factor 39
TrEMBL	A0A0A9JME2	1e-164	A0A0A9JME2_ARUDO; Uncharacterized protein
STRING	GRMZM2G045236_P01	1e-139	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8228	35	45

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Cheng CH, et al. A fine physical map of the rice chromosome 5. Mol. Genet. Genomics, 2005. 274(4): p. 337-45 [PMID:16261349] Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response. Plant Cell Physiol., 2012. 53(1): p. 144-53 [PMID:22084314] Ohta M, et al. Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants. J. Exp. Bot., 2013. 64(18): p. 5429-41 [PMID:24153418] Cheng Q, et al. An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice. Plant Biol (Stuttg), 2015. 17(2): p. 419-29 [PMID:25255693]