PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04086.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 1059aa MW: 113357 Da PI: 10.4083

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04086.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.3	4.3e-06	479	507	3	31
HHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 3 rahnerErrRRdriNsafeeLrellPkas 31 +h+ +Er RR++i +++ L++l+P +s Zmw_sc04086.1.g00020.1.am.mk 479 NSHSLAERLRREKISERMKLLQDLVPGCS 507 58************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	2.94E-4	474	508	No hit	No description
SuperFamily	SSF47459	5.96E-7	474	508	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	10.48	476	525	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.1E-6	479	508	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 1059 aa Download sequence Send to blast
MWIGRRGAGG AEDKCMTRRP TRMVEKFMAQ AHSIEQLLGT LRPTAGLRRH LCRTPQGIQQ 60 ELHKASRGVL ILWSSDSNKV TWAEASDRHL AHFQIPPHPL PELAHAAPPR AQRPSPLAVA 120 GGAVVHPPSS SLPAECLPPL TGECNAPRPA GVAVLKTGQR GSGNKTWMAK EAQLAVSGMP 180 VNHCLRVNSF FTFPCFFNFT FALWLLGFPA LLHRATSALL REVQPRSTDM NNESSEKGME 240 SNRASSGVAG IPVEWQNQFS AAFPCPPAQQ QAPMMDSFAS AGLWASTSQA MGLSDAMSAA 300 RGTGFLAPVP GFLPQGLGHF PVDSGFIERA ARASCFGGGG SGGEMMGSNA GFGAADQPMS 360 NAFGGSSEAL QDRQRKDGND KAEPELDGHE EVPSSEAAGG DCSSKGTLDS KKRRRPNEVL 420 SSNLPANSAN ESVHSKDKGE ESSPATTAGK SKGKGAKETS DAQKEEYIHV RARRGQATNS 480 HSLAERLRRE KISERMKLLQ DLVPGCSKMA YPSLGSQDLS MRPSQDGFQI AANRANHRFL 540 CRTVVHFVAA TEADSRRTQY EACFGIFCRC RQAFQDRQAI DADEASQPPV RGPGRLARSR 600 WVGVSYGDSD AGSDNVSFAD ERAPPHARGS RPADVLPPPT PRPPPSAAAG RPFLSISSVL 660 ADRPLPTRTL RVAATDIPGP SPEPHGMHGR MENWKDKQHS QHGAATCNWN VARSYRCLRL 720 SETSFSSAPR GMTQMRRPCG AQGQRPETTR GHVRSSDSGL PAQQQLTSGT GTPMAGTGMA 780 RGRRGPANIA ATPSPVSISP PPFGAPDHSP ISSTLPRLGM QQPVVPRRAI LKCKRGIAAP 840 GREPRLPGTP GGRCAVRAPE PIEQTDRPGS RPQNFDILHV QGQPNLEDHC IGARARQGRG 900 LRNGKGSTRP GQFAVLVKIC CKMSCAGVVL ALLLSYSALS ASSAEAHEER LSDSAALLVS 960 RKWFRGRKIM AGPGHGGSKK DEVTEGKGAK ITADGGDLRF QGKRDKGLAT RAMFKEPRRG 1020 DTAASAPEFL GMDYNFKLPG RHHRPINNDA PLDARANKP

Sequence ? help Back to Top

Protein Sequence Length: 1059 aa Download sequence Send to blast

MWIGRRGAGG AEDKCMTRRP TRMVEKFMAQ AHSIEQLLGT LRPTAGLRRH LCRTPQGIQQ  60
ELHKASRGVL ILWSSDSNKV TWAEASDRHL AHFQIPPHPL PELAHAAPPR AQRPSPLAVA  120
GGAVVHPPSS SLPAECLPPL TGECNAPRPA GVAVLKTGQR GSGNKTWMAK EAQLAVSGMP  180
VNHCLRVNSF FTFPCFFNFT FALWLLGFPA LLHRATSALL REVQPRSTDM NNESSEKGME  240
SNRASSGVAG IPVEWQNQFS AAFPCPPAQQ QAPMMDSFAS AGLWASTSQA MGLSDAMSAA  300
RGTGFLAPVP GFLPQGLGHF PVDSGFIERA ARASCFGGGG SGGEMMGSNA GFGAADQPMS  360
NAFGGSSEAL QDRQRKDGND KAEPELDGHE EVPSSEAAGG DCSSKGTLDS KKRRRPNEVL  420
SSNLPANSAN ESVHSKDKGE ESSPATTAGK SKGKGAKETS DAQKEEYIHV RARRGQATNS  480
HSLAERLRRE KISERMKLLQ DLVPGCSKMA YPSLGSQDLS MRPSQDGFQI AANRANHRFL  540
CRTVVHFVAA TEADSRRTQY EACFGIFCRC RQAFQDRQAI DADEASQPPV RGPGRLARSR  600
WVGVSYGDSD AGSDNVSFAD ERAPPHARGS RPADVLPPPT PRPPPSAAAG RPFLSISSVL  660
ADRPLPTRTL RVAATDIPGP SPEPHGMHGR MENWKDKQHS QHGAATCNWN VARSYRCLRL  720
SETSFSSAPR GMTQMRRPCG AQGQRPETTR GHVRSSDSGL PAQQQLTSGT GTPMAGTGMA  780
RGRRGPANIA ATPSPVSISP PPFGAPDHSP ISSTLPRLGM QQPVVPRRAI LKCKRGIAAP  840
GREPRLPGTP GGRCAVRAPE PIEQTDRPGS RPQNFDILHV QGQPNLEDHC IGARARQGRG  900
LRNGKGSTRP GQFAVLVKIC CKMSCAGVVL ALLLSYSALS ASSAEAHEER LSDSAALLVS  960
RKWFRGRKIM AGPGHGGSKK DEVTEGKGAK ITADGGDLRF QGKRDKGLAT RAMFKEPRRG  1020
DTAASAPEFL GMDYNFKLPG RHHRPINNDA PLDARANKP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2909	37	85