PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04109.1.g00070.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 224aa    MW: 24916.4 Da    PI: 11.7029
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04109.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.11.4e-10193223236
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 
                                   +ykGVr+++ +g+Wv+eIr+p +   r r +lg++
  Zmw_sc04109.1.g00070.1.am.mk 193 KYKGVRRRP-WGKWVSEIRVPGT---RERLWLGSY 223
                                   8********.**********943...5******99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.75E-8193223IPR016177DNA-binding domain
PROSITE profilePS5103214.776193224IPR001471AP2/ERF domain
PfamPF008471.2E-4193223IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-13193223IPR001471AP2/ERF domain
SMARTSM003800.0016193224IPR001471AP2/ERF domain
CDDcd000183.93E-12193223No hitNo description
PRINTSPR003671.9E-5194205IPR001471AP2/ERF domain
PRINTSPR003671.9E-5216224IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
LWGAGDRRRA SSFCDSASIV ARISYDCAYG FGVFDGAIAA AAQSKPNLED DVKVRHPRSS  60
SLRQNANIQT LGDARASLLS YIVAVVTTSL VGSTRRLDSR HQRGLETVSR RLEWKYGIAA  120
AVRAVLRRAI GGFAEFDRVR QRSFLLRFGP SVRVVVRRPT RQHISCACRT DDAGGEMSRS  180
MASGGAEPRR CNKYKGVRRR PWGKWVSEIR VPGTRERLWL GSYA
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64332951