PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04119.1.g00060.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family HB-other
Protein Properties Length: 65aa    MW: 7473.51 Da    PI: 7.7733
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04119.1.g00060.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox15.82.4e-0531592250
                                    SSS--HHHHHHHHHHCTS-HHHHHHHHHH CS
                        Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqN 50
                                    + y+++ +r+eL+  lgLt+rq   WF+ 
  Zmw_sc04119.1.g00060.1.sm.mkhc 31 DLYLNEGKRTELSVLLGLTDRQQPAWFCH 59
                                    569************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.7E-42958IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 65 aa     Download sequence    Send to blast
MAMDSKPSLH HSERYDAAAH PTLVYIRTHK DLYLNEGKRT ELSVLLGLTD RQQPAWFCHI  60
QMGHG
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2816233