PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04167.1.g00100.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 214aa    MW: 23531.9 Da    PI: 10.5402
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04167.1.g00100.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.2e-17165214154
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                                   s+y+GVr++k +g+Wv+eIr p   g + r++lg+f++ae Aa a++ a+++l+
  Zmw_sc04167.1.g00100.1.am.mk 165 SQYRGVRRRK-WGKWVSEIRQP---GTKVRVWLGSFDSAEAAAVAHDVAALCLR 214
                                   78*****998.**********8...325***********************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.22E-15165198No hitNo description
PfamPF008476.2E-11165214IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-17165213IPR016177DNA-binding domain
PROSITE profilePS5103220.798166214IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-24166214IPR001471AP2/ERF domain
SMARTSM003804.3E-22166214IPR001471AP2/ERF domain
PRINTSPR003679.7E-10167178IPR001471AP2/ERF domain
PRINTSPR003679.7E-10189205IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MDAWIPFLLP VPGTARFLLP PGGRISAAAY RDTAGPDRMD AWIPFLLPVP GTARFLLPPG  60
GRISAAAYRD TAGRVVMRYS AALPAAYKYP ASQSHRCVLP RTTSTCIALS LRAARSIELS  120
VMENQQQQQQ PQLVANNDHQ QQQLLQLVAN NDQQQQLETT AAASSQYRGV RRRKWGKWVS  180
EIRQPGTKVR VWLGSFDSAE AAAVAHDVAA LCLR