PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04250.1.g00030.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 247aa    MW: 26764.7 Da    PI: 11.6416
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04250.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.40.000281872291055
                                   HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   rrR + +  ++e Lr+l+P++   ++   +    L  A  YI  Lq
  Zmw_sc04250.1.g00030.1.am.mk 187 RRRDAAVTRRMEALRRLVPTS---YGDQDDELLLLSAAAGYIARLQ 229
                                   778888999***********9...9*****************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.55177228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-5187238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-8187244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MYMKRINMIL PETTTTPTVL RNCANSRVPN LRSNQIRRRD ERARVDRADC LPACLPAGDD  60
MPTHETRNIV IVVVVGLANS SSHASTKTQS LAASSPAPSS HTHTRCNGLS PRLLVTISLQ  120
SATTIYKADS IVAMGAPTGR RRCSASSASM RARLPVASAV PSRRLPSSYR TTSTKASGGD  180
GKVRSSRRRD AAVTRRMEAL RRLVPTSYGD QDDELLLLSA AAGYIARLQA QVRVMQLMAN  240
ILEHAQG
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91112126