PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04391.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 186aa    MW: 19813.9 Da    PI: 7.2926
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04391.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.8e-191867255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  +y+GVr+++ +gr++AeIrdp    k++ ++lg+f++ae Aa+a++aa+++l+g
  Zmw_sc04391.1.g00040.1.sm.mk 18 RYRGVRRRP-SGRYAAEIRDPA---KKTPIWLGTFDSAEAAARAYDAAARSLRG 67
                                  59*******.7*********83...36*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.9E-331881IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-211875IPR016177DNA-binding domain
PROSITE profilePS5103222.1681875IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-291876IPR001471AP2/ERF domain
CDDcd000187.76E-161874No hitNo description
PfamPF008475.6E-121867IPR001471AP2/ERF domain
PRINTSPR003677.5E-81930IPR001471AP2/ERF domain
PRINTSPR003677.5E-84157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MRRNKPPQPQ PSPSPEIRYR GVRRRPSGRY AAEIRDPAKK TPIWLGTFDS AEAAARAYDA  60
AARSLRGPTA RTNFPSAAPR PRAPAPVPAA TSSHSSTVES WSGGAPRAVS TLARSAAPTE  120
EEEDCHSYCG SSSFVLCEDA GCDDAAASRS PLPFDLNLPP PLDAAAEADQ IDADQIGARY  180
DTLLRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1918751472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021306174.13e-71ethylene-responsive transcription factor 3
TrEMBLA3BEV85e-74A3BEV8_ORYSJ; Uncharacterized protein
STRINGSb10g028110.11e-72(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61022347