PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04409.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 259aa MW: 27981.1 Da PI: 8.0323

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04409.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00049	217	236	36	55
S-STCHHHHHHHHHHHHHHH CS HLH 36 kKlsKaeiLekAveYIksLq 55 + s a++L +Ave+I+ Lq Zmw_sc04409.1.g00070.1.sm.mkhc 217 RQTSTADMLDLAVEHIRGLQ 236 4499***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	9.18E-4	211	240	No hit	No description
SuperFamily	SSF47459	5.37E-5	216	252	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.3E-4	216	250	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence Send to blast
MNPPPDRRGR ARYGGCSAAV PFVVDPTEGP AGASVRVFFP APEGGGQEPS SSAERQQRYG 60 ADISLGHGMH RYHHARVGGG SDVHQATNSY NKKMNSPMNL PRQGTLTQIS EDGVPPLTEN 120 MHPIGHPEEN ITANNVARSF SGGFSIGSWE DSNSIAVSNP SSKAGMHNND DIIAALRNYE 180 LQFGATEANQ KMQQDQVPFR VRAKRGCATH PRSIAERQTS TADMLDLAVE HIRGLQSELQ 240 VLKEEKGKCS CRGKPPSVN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025825346.1	3e-99	transcription factor bHLH129-like
TrEMBL	A0A2T7CWM6	5e-99	A0A2T7CWM6_9POAL; Uncharacterized protein
STRING	Si010513m	9e-96	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14188	20	26