PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04440.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 643aa MW: 71939.2 Da PI: 8.9425

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04440.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	57.4	2.8e-18	367	408	9	50
RWP-RK 9 dlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 ++++ F+l i+dAA eLg+c++ +K iCR++G++RWP Rk++ Zmw_sc04440.1.g00070.1.am.mk 367 EIRARFHLRIEDAAAELGICQSSIKGICRKHGVPRWPGRKVR 408 7999************************************96 PP
2	RWP-RK	25.6	2.4e-08	532	564	14	46
RWP-RK 14 FslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 +l ++dAA Lg+++ LK CR +G++RW Zmw_sc04440.1.g00070.1.am.mk 532 LHLRLNDAAAALGISTDRLKFVCRSNGLRRWTG 564 6999***************************65 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14736	1.04E-16	291	349	No hit	No description
PROSITE profile	PS51519	14.311	345	430	IPR003035	RWP-RK domain
Pfam	PF02042	6.1E-16	367	408	IPR003035	RWP-RK domain
PROSITE profile	PS51519	10.569	510	590	IPR003035	RWP-RK domain
Pfam	PF02042	6.2E-7	530	562	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence Send to blast
MHQSNPPTEK VPDLMKLPTP RPLCRVYPTI RNSCAPLVVS AAYIDDVLVL RCYQQAGRWG 60 KIEELWLRGL GSRGVAARSG WGNGGAASTT GAHPGERRQG GEMRELDFHD DESGDGVPHE 120 IGQPTEHVVI IVGDDYPRGG KTLFTPTTSK QKAVQGAPWE LTWDLLLGQW DHHRLALRDH 180 ERATNEATAS WQLPHAGLSL ARSSLEGWRL GPGGWRQVLT VDAGEWQQHA CAGGRWEWCD 240 LKSSRHLHFI YTNSTCRCTK SPTREEKKDL MKHLLVAVDR CDVEKLKSDC DVEDPSTLLV 300 LADQHNSSKL KDACTEFICC PEDNMAAVVA SEGYSHLKES CTDVLEELRG LKNRGKKRTM 360 DEPEWPEIRA RFHLRIEDAA AELGICQSSI KGICRKHGVP RWPGRKVRFM LGQLGKLAIE 420 ARARQGAAPG EEGGHRRREM IAMDISKVLE EVARVLQLLP SSDANPTTKI ILTAEDRDCG 480 SVLFKGLQDW RRWSVTWPPP STEKKATLVL VVFTMPRRRA ASPPWSEVLG VLHLRLNDAA 540 AALGISTDRL KFVCRSNGLR RWTGMTIRSL NAKLRRLIQV AAVAKADALP WWQAPHRRRL 600 GTITREARRV IHDLDGIYER FRNLAPLPQR ASDGTLNLID NVG

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence Send to blast

MHQSNPPTEK VPDLMKLPTP RPLCRVYPTI RNSCAPLVVS AAYIDDVLVL RCYQQAGRWG  60
KIEELWLRGL GSRGVAARSG WGNGGAASTT GAHPGERRQG GEMRELDFHD DESGDGVPHE  120
IGQPTEHVVI IVGDDYPRGG KTLFTPTTSK QKAVQGAPWE LTWDLLLGQW DHHRLALRDH  180
ERATNEATAS WQLPHAGLSL ARSSLEGWRL GPGGWRQVLT VDAGEWQQHA CAGGRWEWCD  240
LKSSRHLHFI YTNSTCRCTK SPTREEKKDL MKHLLVAVDR CDVEKLKSDC DVEDPSTLLV  300
LADQHNSSKL KDACTEFICC PEDNMAAVVA SEGYSHLKES CTDVLEELRG LKNRGKKRTM  360
DEPEWPEIRA RFHLRIEDAA AELGICQSSI KGICRKHGVP RWPGRKVRFM LGQLGKLAIE  420
ARARQGAAPG EEGGHRRREM IAMDISKVLE EVARVLQLLP SSDANPTTKI ILTAEDRDCG  480
SVLFKGLQDW RRWSVTWPPP STEKKATLVL VVFTMPRRRA ASPPWSEVLG VLHLRLNDAA  540
AALGISTDRL KFVCRSNGLR RWTGMTIRSL NAKLRRLIQV AAVAKADALP WWQAPHRRRL  600
GTITREARRV IHDLDGIYER FRNLAPLPQR ASDGTLNLID NVG

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP18443	5	9