PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04570.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 106aa MW: 12179.5 Da PI: 4.7879

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04570.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	36.4	1.2e-11	49	73	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt eLHerFveav++L G+e Zmw_sc04570.1.g00010.1.sm.mkhc 49 KPRLRWTMELHERFVEAVNKLEGPE 73 79*******************9997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.3E-10	48	74	IPR009057	Homeodomain-like
Pfam	PF14379	9.1E-8	88	106	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 106 aa Download sequence Send to blast
MVLNPGQSSS SSSLLYDADL NGGCHDDAEH SVDLRDFLNL SGDASEGNKP RLRWTMELHE 60 RFVEAVNKLE GPESRKYRFA KYLPETKEEA LRMQMEVQKQ LHEQLE

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250\|UniProtKB:Q6YXZ4}.
UniProt	Transcription factor involved in phosphate starvation signaling (PubMed:26082401). Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes (PubMed:26082401). Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis (PubMed:26082401). {ECO:0000269\|PubMed:26082401}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated under Pi starvation conditions. {ECO:0000269\|PubMed:26082401}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025799346.1	1e-20	protein PHOSPHATE STARVATION RESPONSE 3-like
Swissprot	A2X0Q0	1e-18	PHR3_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 3
Swissprot	Q6YXZ4	1e-18	PHR3_ORYSJ; Protein PHOSPHATE STARVATION RESPONSE 3
TrEMBL	A0A0A9Q0P8	1e-20	A0A0A9Q0P8_ARUDO; Uncharacterized protein
STRING	Pavir.J14911.1.p	3e-20	(Panicum virgatum)

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]