PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04579.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

ERF

Protein Properties

Length: 89aa MW: 9501.04 Da PI: 10.0098

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04579.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	23	2e-07	62	89	27	54
AP2 27 krkrfslgkfgtaeeAakaaiaarkkle 54 + r++lg+f++ae Aa a++ a+++l+ Zmw_sc04579.1.g00010.1.am.mk 62 TKVRVWLGSFDSAEAAAVAHDVAALCLR 89 349**********************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51032	11.97	29	89	IPR001471	AP2/ERF domain
SMART	SM00380	0.0092	55	89	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	1.3E-10	58	89	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	2.29E-7	60	88	IPR016177	DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 89 aa Download sequence Send to blast
MDAWIPFLLP VPGTARFLLP PGGRISAAAY RDTAGRVVMR YSAALPAAYK YPASQSHRCP 60 GTKVRVWLGS FDSAEAAAVA HDVAALCLR

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11503	2	2