PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04622.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 538aa MW: 58736.8 Da PI: 8.5381

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04622.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.5	2.7e-32	200	340	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyat 70 lp+G++F+Ptd+el+ e+L+ k++ + + + +i+ +i++++P++Lp v ++ +fF++ +k+y+t Zmw_sc04622.1.g00040.1.am.mk 200 LPAGVKFDPTDQELL-EHLEGKARPDVcklhplI---DefipTIEGEnGICYTHPERLP-GVGKDGLIRHFFHRPSKAYTT 275 799**********.99999984444332...143333665557******.555555677******** PP NAM 71 gkrknratk......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 g+rk+r+++ + +W++tgk+++v+s +g+l+g kk+Lv+y g+++k+ekt+Wvmh+y+l Zmw_sc04622.1.g00040.1.am.mk 276 GTRKRRKVHtgdqggETRWHKTGKTRPVFS-NGRLKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 340 **855345544667********.999*******6657999999*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.16E-37	190	359	IPR003441	NAC domain
PROSITE profile	PS51005	33.1	200	359	IPR003441	NAC domain
Pfam	PF02365	2.3E-14	201	340	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence Send to blast
MDVGVSDLHR CARSNVLSVV GLGAEDRSGA SPGFRLTRVR SVPPSLGAIF WAATQSWLEF 60 YSLYQPDSEG NRHRSTAPSC SREHGGSIDR VVCLACVAYR SFLRGSAASL AFAPYGGEEE 120 SVARSRGQAE AFLLPSDPLI VEEEDKVENN LATVAAIAAA KKQEQATSHV NLIRTCPSCG 180 HGAQYEQMQA AATIQDLPGL PAGVKFDPTD QELLEHLEGK ARPDVCKLHP LIDEFIPTIE 240 GENGICYTHP ERLPGVGKDG LIRHFFHRPS KAYTTGTRKR RKVHTGDQGG ETRWHKTGKT 300 RPVFSNGRLK GYKKILVLYT NYGKQRKPEK TNWVMHQYHL GPDEEEKDGE LVVSKVFYQT 360 QPRQCGGGGS MTTAKDAAPL PAATDHHQHD GANSMLKAPG IVDFYSPAEL SSYNQAAPNS 420 RAAASAHLIP NFEVHRAGAA GFVFGRHTLL VGGHKPAVGG ANPYTALDRR LAGSGRRPSA 480 ALHTGSRFIG RLLALNLSQV NSEFDQGVHR NQNTDEQESG TCNQHKRWNS DWEQSLRL

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence Send to blast

MDVGVSDLHR CARSNVLSVV GLGAEDRSGA SPGFRLTRVR SVPPSLGAIF WAATQSWLEF  60
YSLYQPDSEG NRHRSTAPSC SREHGGSIDR VVCLACVAYR SFLRGSAASL AFAPYGGEEE  120
SVARSRGQAE AFLLPSDPLI VEEEDKVENN LATVAAIAAA KKQEQATSHV NLIRTCPSCG  180
HGAQYEQMQA AATIQDLPGL PAGVKFDPTD QELLEHLEGK ARPDVCKLHP LIDEFIPTIE  240
GENGICYTHP ERLPGVGKDG LIRHFFHRPS KAYTTGTRKR RKVHTGDQGG ETRWHKTGKT  300
RPVFSNGRLK GYKKILVLYT NYGKQRKPEK TNWVMHQYHL GPDEEEKDGE LVVSKVFYQT  360
QPRQCGGGGS MTTAKDAAPL PAATDHHQHD GANSMLKAPG IVDFYSPAEL SSYNQAAPNS  420
RAAASAHLIP NFEVHRAGAA GFVFGRHTLL VGGHKPAVGG ANPYTALDRR LAGSGRRPSA  480
ALHTGSRFIG RLLALNLSQV NSEFDQGVHR NQNTDEQESG TCNQHKRWNS DWEQSLRL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004969491.1	1e-174	NAC domain-containing protein 73
TrEMBL	K3XK78	1e-173	K3XK78_SETIT; Uncharacterized protein
STRING	Si002301m	1e-174	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3075	37	86