PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04635.1.g00090.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 288aa MW: 32259.4 Da PI: 10.0945

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04635.1.g00090.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	94	1.6e-29	33	130	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 +++rlws+ De+v+L+Gl ++ak+g+ ++ di++++ + + +s+kvs++ql++K+rrLK+K+++ +++k+g+ep+f Zmw_sc04635.1.g00090.1.am.mk 33 RPSRLWSQGDELVILRGLAAYRAKHGAlpGSMYDISKLHGNIGEVLSVKVSTTQLSDKVRRLKQKYHQLATRTKNGREPDF 113 679**********************666677******************************************** PP DUF573 81 skehdqkifelskkiWg 97 +++d++++el kk+Wg Zmw_sc04635.1.g00090.1.am.mk 114 PTSQDHSVYELGKKVWG 130 **************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	1.1E-26	35	130	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence Send to blast
MDPPRRSAPS FSESRPKRPR SAAIPAVMEH LKRPSRLWSQ GDELVILRGL AAYRAKHGAL 60 PGSMYDISKL HGNIGEVLSV KVSTTQLSDK VRRLKQKYHQ LATRTKNGRE PDFPTSQDHS 120 VYELGKKVWG AIGSAGADAD AGGGGAIVEH ENTDGLHSEE EHQSGESDGD MDIWRDDHDR 180 KNKRVKPISM ANGNGTRFGA MSSSRRGKAE FEKGKDAYPY LWETVEELSR QHPNGVAFKK 240 AFEMIEGTKA RGMEEKLRKF RVAEVRHQLR RMELMKETVK MVLDALEG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002460312.1	1e-137	STOREKEEPER protein
TrEMBL	C5X278	1e-135	C5X278_SORBI; Uncharacterized protein
STRING	Sb02g026310.1	1e-136	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2671	35	87