PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04661.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 220aa    MW: 23779.2 Da    PI: 8.0989
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04661.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1361.5e-11107161357
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                                   e +r rr ++NRe+ArrsR+RK+ ++ eL   v  L + N++L + l++    +a
  Zmw_sc04661.1.g00010.1.am.mk 107 EERRRRRTASNRESARRSRLRKQRQLTELWVQVSHLRGANRRLLDDLNRVLRSCA 161
                                   67899*****************************************999877776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.2E-8104161No hitNo description
SMARTSM003383.8E-8104169IPR004827Basic-leucine zipper domain
PfamPF001704.7E-9106161IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.22107170IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.38E-9109158No hitNo description
PROSITE patternPS000360112127IPR004827Basic-leucine zipper domain
CDDcd147021.86E-13116161No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MYNNFQGEVA SLRFLSPPNP SFAAHHHMNM AVPPQACFPP SFEQTSTFQE DAAVVAALLA  60
GDDVASFELD TVVQEAAHVA GGNGSPSSQS GFDGGGAGYP LNASAEEERR RRRTASNRES  120
ARRSRLRKQR QLTELWVQVS HLRGANRRLL DDLNRVLRSC ADARRESARL KDEKAELAKK  180
LDQLLQTATP AEKSAGSGAP SSNPSCSSEP GNNTSTRTSE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108113RRRRRT
2121127RRSRLRK
3121128RRSRLRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025821559.17e-90bZIP transcription factor 2-like
TrEMBLA0A3L6PRK21e-88A0A3L6PRK2_PANMI; G-box-binding factor 1
STRINGPavir.Fb01824.1.p2e-77(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126