PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04707.1.g00090.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 867aa    MW: 94283 Da    PI: 7.0161
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04707.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.61.5e-166277527127
                           NAM   7 FhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknratksg 81 
                                   F+Ptdeel+ +yL ++  gk+  ++ v +++ +  +++Pw+L +    ++  +++   +f+++ ++     +r++r    g
  Zmw_sc04707.1.g00090.1.am.mk 627 FDPTDEELIEHYLLPRSLGKPEAFSVViVEDNKAANTQPWKLFQnhdlMALIDDHlPAFFYVRDERP--DARRSRRCEGGG 705
                                   9********************777666356669*********6334542222444355777777664..567999999999 PP

                           NAM  82 yWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                    Wk + +    d++vl   ++++ ++++ L ++  +     +  Wvmhe+ 
  Zmw_sc04707.1.g00090.1.am.mk 706 WWKIQKSeskdDRHVLIVgGRKVRWTRNNLNLHLDSG----SVGWVMHEFF 752
                                   9*966542333566666556777899*******5443....568*****96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF127961.0E-1072147IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.202.8E-4180351IPR020683Ankyrin repeat-containing domain
CDDcd002047.61E-1780219No hitNo description
SuperFamilySSF484031.29E-3680347IPR020683Ankyrin repeat-containing domain
SMARTSM002480.2485114IPR002110Ankyrin repeat
PROSITE profilePS5029738.30385348IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500889.08485107IPR002110Ankyrin repeat
SMARTSM002480.2123152IPR002110Ankyrin repeat
PROSITE profilePS500888.763123155IPR002110Ankyrin repeat
SMARTSM00248650157186IPR002110Ankyrin repeat
SMARTSM0024880190227IPR002110Ankyrin repeat
CDDcd002049.11E-17190320No hitNo description
PfamPF127963.7E-7213284IPR020683Ankyrin repeat-containing domain
SMARTSM002486.1232261IPR002110Ankyrin repeat
SMARTSM002482300266294IPR002110Ankyrin repeat
SMARTSM002484000306336IPR002110Ankyrin repeat
PfamPF139629.0E-21393503IPR026961PGG domain
PROSITE profilePS5100519.434621784IPR003441NAC domain
SuperFamilySSF1019411.14E-19627758IPR003441NAC domain
PfamPF023653.1E-12627751IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 867 aa     Download sequence    Send to blast
AAKRGDWSRL GDLRSEEELA FVPEVVVDID VDSDPPAATK WTHAYGPGSV LHVVAAGGED  60
DAFLTGATEI YGKAKHLLAD SCDAKGDTPL HCAARSGSVK MLSSLVDLAG SRVQTALRKR  120
NRSGETVLHE AVRWADEEMV RVLVSADAGL ARVPRGNSAS PLYLAILLGH DGIAELLHAM  180
DDRLSYSGPD GQNALHVAVL RSETSRNSPM SPTVAKLLLE ADESSAYQSD NNGSFPIHAA  240
ASGKNTDFIR VLLQRCPDCA QLRDGRGRTF LHIAVENDPA PFRSLLPLKG NQVRRFAAIL  300
NAQDDEGSTV LHLAVKAGRP LTIYPLMWSK EVQLNLQNQK GQTALDLSLS KKPSGDPNLR  360
IHDLSISAGA NYGVQRGGEK ARDPPLDPKV EAKKIKDSTT TIGVVSVLII TISFAAAFQL  420
PGGYTSDRPQ KGTPELAKKY SFEAFLIANN LALLCATMAT ISLMYAGVSI VDINTRMIAF  480
FTSIFFLNSS ARSLAAAFVF GTQAVLAPVD HAASVVTWLA TGLILLDIAW FTCNICLEHI  540
VLKNRLGTKA YIRAACSLVS VPLGALWPYV VVGKGHRLGL AARSSYAYRP RRNRARPPPR  600
HPGAALPPHP IIRDQPRGTG HVNTRIFDPT DEELIEHYLL PRSLGKPEAF SVVIVEDNKA  660
ANTQPWKLFQ NHDLMALIDD HLPAFFYVRD ERPDARRSRR CEGGGWWKIQ KSESKDDRHV  720
LIVGGRKVRW TRNNLNLHLD SGSVGWVMHE FFIDDHPLLK PDGHSHDDAS LGGEQPVTQR  780
LLVTAAAGSS SADSTTTTTS LDQNLGTAHA SEDQEHPSAS AMPMPIHNSR ADLDPVNIIY  840
DGEFQALLAT ADAAMAPFRV LFNHDEE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6moj_A1e-1312834915217Dimeric DARPin ACR5 (A_angle_R5)
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003562102.20.0protein ACCELERATED CELL DEATH 6
TrEMBLA0A2K2DVC21e-180A0A2K2DVC2_BRADI; Uncharacterized protein
STRINGPavir.Gb01904.1.p1e-165(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19922