PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04721.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 237aa MW: 25202.4 Da PI: 10.8198

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04721.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	40.6	5.2e-13	88	119	31	61
zf-Dof 31 yfCka.CrryWtkGGalrnvPvGggrrknkks 61 +fC r+Wt+G +lrn+PvGgg+rknk++ Zmw_sc04721.1.g00050.1.am.mk 88 FFCSPlSCRFWTHGSSLRNIPVGGGCRKNKSA 119 688742348********************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-5	88	117	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.6E-7	88	118	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence Send to blast
LAPLGHPQPI PRQRPVWAIK SDLLRGALGL PSSPRLSFAP QLSSPLRSPP SAVGSQAILC 60 PLPRWFWPFA IRYTPAAPPG TVDLDAPFFC SPLSCRFWTH GSSLRNIPVG GGCRKNKSAS 120 PLPLSTSSSI NKLQNLLVPT SSSIARATRL TPMCSKRLSP PASKPPGVTC LPPLSSPILA 180 LAPLLDYNTG MMMSSFLDML RGGFLEHQGS GTEQPSSLDS VVSGSMGWLA NMVVVQQ

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP44970	2	2