PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04732.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 618aa MW: 66656.1 Da PI: 9.0357

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04732.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	83.9	1.5e-26	330	379	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i +++++kyF++pi++AA+e++v+lTvLK++CR++G++RWPhRk+ks+ Zmw_sc04732.1.g00010.1.am.mk 330 DHIGFNEIRKYFYMPITKAAREMNVGLTVLKKRCRELGVARWPHRKMKSI 379 6899********************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.666	317	400	IPR003035	RWP-RK domain
Pfam	PF02042	1.6E-20	332	379	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence Send to blast
MTRTFSQRAC AAARLNRGRS VRGSGSREPT NAPAAGRPHH QRPLHDRLHA LHTAVTRLDR 60 LASRIYTSAA TVTCHCHCSP ASYVRRPSNS ASAHGESLVD PALLDWASSS SVVGNGDDLV 120 PAGSEEGDLL AVIAPPGPRN LEIRNSNLAS SSDHGPLLLP VPDDSSSSSA MILRNEESHR 180 LPVSPAAYDP SYYFDGLPPL PETAGGLDDP LMLQPFSDID LDAFGGADEH IKASPPADDI 240 MIVVPADRPY AAGQVAGVDG GNGDPKPVAT VADCYHPPAD SVDFGMAAMR YGERSDQASS 300 VAALPPPMPR LRHQVRMRSG TDPAGKTRLD HIGFNEIRKY FYMPITKAAR EMNVGLTVLK 360 KRCRELGVAR WPHRKMKSIK ALILNVQEMG KGMSPAAVQR ELAALETYCA LMEADPSIEL 420 TDRTKKLRQA CFKESYKRRR AASFNGKIDH IYNFGHELLQ AAQGGKLTPQ ESSAGTGTAA 480 APRVPGSGSS RRRSARPSSK PSAPLWPDAM EEVGEAAEEV DEEARRREDP GEAAAAPWRT 540 GWRRSPPWRT RRRPRAVEVD GEAAAAPWRT GWRRSQLQVT GQLAQTSSTS SLAASPPSHR 600 LPHPSPLLPP LLGCPHPG

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence Send to blast

MTRTFSQRAC AAARLNRGRS VRGSGSREPT NAPAAGRPHH QRPLHDRLHA LHTAVTRLDR  60
LASRIYTSAA TVTCHCHCSP ASYVRRPSNS ASAHGESLVD PALLDWASSS SVVGNGDDLV  120
PAGSEEGDLL AVIAPPGPRN LEIRNSNLAS SSDHGPLLLP VPDDSSSSSA MILRNEESHR  180
LPVSPAAYDP SYYFDGLPPL PETAGGLDDP LMLQPFSDID LDAFGGADEH IKASPPADDI  240
MIVVPADRPY AAGQVAGVDG GNGDPKPVAT VADCYHPPAD SVDFGMAAMR YGERSDQASS  300
VAALPPPMPR LRHQVRMRSG TDPAGKTRLD HIGFNEIRKY FYMPITKAAR EMNVGLTVLK  360
KRCRELGVAR WPHRKMKSIK ALILNVQEMG KGMSPAAVQR ELAALETYCA LMEADPSIEL  420
TDRTKKLRQA CFKESYKRRR AASFNGKIDH IYNFGHELLQ AAQGGKLTPQ ESSAGTGTAA  480
APRVPGSGSS RRRSARPSSK PSAPLWPDAM EEVGEAAEEV DEEARRREDP GEAAAAPWRT  540
GWRRSPPWRT RRRPRAVEVD GEAAAAPWRT GWRRSQLQVT GQLAQTSSTS SLAASPPSHR  600
LPHPSPLLPP LLGCPHPG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004971918.1	2e-87	uncharacterized protein LOC101757335
Refseq	XP_025815472.1	1e-87	uncharacterized protein LOC112892548
TrEMBL	A0A3L6SLA0	1e-86	A0A3L6SLA0_PANMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12888	23	30